Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 244 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Vibrio cholerae E7946 ATCC 55056

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 51/153 (33%), Positives = 82/153 (53%), Gaps = 5/153 (3%)

Query: 5   VILVNPKYGGNLGAIARNMMNFDVEELRIVGTPEILDDEAYIRAVHAKNILNNAKFYSKL 64
           V+LV   + GN+G+ AR M    + ++ +V     +D +A   A  A  I  NA+ Y  L
Sbjct: 8   VVLVGTTHSGNIGSAARAMKVMGLSQMVLVDPQCQVDAQAIALAAGASEIALNAQIYPTL 67

Query: 65  EDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKKHSSISG--TLGIVFGREDDGLKNE 122
           E A++D    V T+      R +    + PRE  +K  S +   ++ +VFGRE  GL N+
Sbjct: 68  EAAVADCGLVVGTSAR---SRTLEWPMLEPRECGEKLISEANQHSVAMVFGRERTGLTND 124

Query: 123 DVELCDILVSVPTSNKYPILNLSHAVSVILYEI 155
           +++LC   V VP + +Y  LNL+ AV ++ YE+
Sbjct: 125 ELQLCHYHVCVPANPEYSSLNLAMAVQLLSYEV 157