Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 259 a.a., RNA methyltransferase, TrmH family, group 1 from Dechlorosoma suillum PS

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 5/158 (3%)

Query: 5   VILVNPKYGGNLGAIARNMMNFDVEELRIVGTPEILDDEAYIRAVHAKNILNNAKFYSKL 64
           V+L N  + GN+GA AR M    +  L +V   +  DDEA  RA  A ++L +A+  + L
Sbjct: 15  VVLCNTSHPGNIGAAARAMKTMGLSRLTLVNPKQFPDDEATARASGAADVLEHARICTSL 74

Query: 65  EDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKK--HSSISGTLGIVFGREDDGLKNE 122
           ++A+     TV         R++  +P   R+   +    +  G + +VFG E  GL N 
Sbjct: 75  KEALQG---TVLAAALSARQRDLGPIPRPARQAVPELLQWTAQGDIALVFGGETSGLTNA 131

Query: 123 DVELCDILVSVPTSNKYPILNLSHAVSVILYEIYFESF 160
           +VE C  LV+VP +  Y  LNL  AV V+ YE+   +F
Sbjct: 132 EVEQCQRLVTVPVNPDYGSLNLGAAVQVLCYEVRQAAF 169



 Score = 24.6 bits (52), Expect = 0.002
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 2   KTVVILVNPKYGG-NLGAIARNMMNFDVEELRIVGTPEI 39
           + V + VNP YG  NLGA A  ++ ++V +    G P +
Sbjct: 138 RLVTVPVNPDYGSLNLGA-AVQVLCYEVRQAAFDGAPPV 175