Pairwise Alignments

Query, 234 a.a., TrmJ/YjtD family RNA methyltransferase from Methanococcus maripaludis S2

Subject, 241 a.a., RNA methyltransferase, TrmH family, group 1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.7 bits (208), Expect = 1e-21
 Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 7/223 (3%)

Query: 5   VILVNPKYGGNLGAIARNMMNFDVEELRIVGTPEILDDEAYIRAVHAKNILNNAKFYSKL 64
           VILV   + GN+G+ AR M    +  L +      +D ++   A  A +IL +      L
Sbjct: 7   VILVGTSHPGNIGSTARAMKTMGLSTLYLAEPRCEVDGQSIALAAGASDILKHLVKVDSL 66

Query: 65  EDAISDIDFTVATTGAVCGDRNVNRVPITPRELAKK--HSSISGTLGIVFGREDDGLKNE 122
           ++AI+D    +AT+      R ++   + PRE  +K     I+G + IVFGRE+ GL NE
Sbjct: 67  QEAIADCSLVIATSAR---SRTLDWPMLEPREAGQKLVTEGITGPVAIVFGRENHGLTNE 123

Query: 123 DVELCDILVSVPTSNKYPILNLSHAVSVILYEIYFESFSK-DIPYDLNMKNASVDEKNAL 181
           +++ C   V++P + +Y  LNL+ AV +I YE      ++ + P  +     S D +   
Sbjct: 124 ELQQCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHLAQMEAPQAVEEYPLSADLERFF 183

Query: 182 LRFFNEFVDRSKDVPDYRKDICKTIFKRIVGRAFISGKEANSL 224
           +   +        + ++   +  T  +R+  RA I  +E N L
Sbjct: 184 VHLESTLSSTGFIIKNHPGQV-MTKLRRMFSRARIESQEMNIL 225