Pairwise Alignments

Query, 505 a.a., AMP phosphorylase from Methanococcus maripaludis S2

Subject, 443 a.a., thymidine phosphorylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  136 bits (342), Expect = 2e-36
 Identities = 112/414 (27%), Positives = 189/414 (45%), Gaps = 20/414 (4%)

Query: 93  IKKKMDGQVLNPHEIRTIIDEIVSKKLSNIELSAFVSSTYINGMNMDEIGEMTKRIAETG 152
           I+KK +G VL+  EI+  +  I +  +S  +++A   + Y N MNMDE   +T  + ++G
Sbjct: 8   IRKKRNGLVLSAEEIQFFVKGITTNAVSEGQIAALGMAVYFNDMNMDERIALTTAMRDSG 67

Query: 153 DMISWEK-NL---VVDIHSIGGVPGNKYALLSIPILAAAGITIPKTSSRAITSPAGTADV 208
            +++W+  NL   V+D HS GGV G+  +L+  P+ AA G  +P  S R +    GT D 
Sbjct: 68  TVLNWQSLNLNGPVIDKHSTGGV-GDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLDK 126

Query: 209 MEVLTNVELK-EDEIKRIVKTTNGCLVWGGGVNLAPADDIIINV-ERPVSIDPQPQLLAS 266
            + +   + +   E+ R V    G  + G   +L PAD    ++ +   +++    + AS
Sbjct: 127 FDAIPGYQTEPSSELFRKVVKDVGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITAS 186

Query: 267 VMAKKIATGIKYSVIDIPVGKGVKIKNEAEGAKLARKFIELGELLNIKVECVLTYGGQPL 326
           +++KK+A  +    +D+ VG G  +       +LAR    +      K   +LT   Q L
Sbjct: 187 ILSKKLACSLDALAMDVKVGSGAFMPTYEASEELARSIAAVANGAGTKTTALLTDMNQVL 246

Query: 327 GRAIGPALEAKEAIEALQDPKNAPKSLIEKALSLAGILLELGG-AAQIGEGQNLAWEILE 385
               G ALE KEAI+ L      P+ L    + L   +L LGG A    + +     +L+
Sbjct: 247 ASCAGNALEVKEAIDFLTGAYRNPR-LYAVTMGLCAEMLLLGGLATDEADARAKLNRVLD 305

Query: 386 SGRALEKFNQIIIEQGGTPKKPEE----IELGDYIEEIIAPIDGYV--TDINNTGITNVV 439
           +GRA E F +++   GG     E     +     I  + A   GY    D    G+  V 
Sbjct: 306 NGRAAEIFGKMVSGLGGPVDFVENYSKYLPQSQIIRPVFADTQGYAHSMDTRELGLAVVT 365

Query: 440 -----KEAGAPRDKKAGLLLNSKIGNKVKKGDVLYTIYSGSEERLVSAVNLARR 488
                ++ G   D   GL     +G+K+     +  I++ SEE    A +  ++
Sbjct: 366 LGGGRRKPGDELDYSVGLTQVCALGDKIDASTPIAVIHAQSEEAFAQAEDAVKK 419