Pairwise Alignments

Query, 663 a.a., methionine--tRNA ligase from Methanococcus maripaludis S2

Subject, 676 a.a., methionyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  361 bits (927), Expect = e-104
 Identities = 214/655 (32%), Positives = 344/655 (52%), Gaps = 27/655 (4%)

Query: 4   LVTTALAYTNGPLHLGHARSTYIPADIFTRYLKLKGEEVIHVGGTDNHGVPITLTAEKEG 63
           LVT+AL Y NGP+HLGH    YI  DI++RY KL+G E  ++   D HG PI L A++ G
Sbjct: 9   LVTSALPYANGPIHLGHMLE-YIQTDIWSRYQKLRGHECHYICADDAHGTPIMLKAQQLG 67

Query: 64  VKPIDIVDRYHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGYIYEKEIEQ 123
           + P +++ + +   + D    NI FDN+  THS+ +   A + Y KL+ NGYI  K I Q
Sbjct: 68  MAPEEMIAQVNKEHQQDFADFNIAFDNYHSTHSEENRVLASDIYLKLRANGYIKSKSISQ 127

Query: 124 FYCEKCDMYLADRYVEGICPFCEG-EARGDHCEVCGRHLEPTELVNPYCIHCNSKPEIKR 182
            +  +  M+L DR+V+G CP C+  +  GD+C+ CG    PTEL+NP      + P +K 
Sbjct: 128 LFDPEQSMFLPDRFVKGTCPKCKSPDQYGDNCDACGATYSPTELINPKSAVSGATPVMKD 187

Query: 183 TTHYFFKLSAMQDSLKEYIENSPEMPEHVKNMALRWIEE-LHDWDVSRNIKW-GVPIPGC 240
           T H+FF L A +D LKE+   S  +   + N    W E+ L  WD++R+  + G  IP  
Sbjct: 188 TEHFFFDLPAFEDMLKEW-TRSGALQTEMANKLDEWFEQGLQQWDITRDAPYFGFEIPDA 246

Query: 241 DDQVMYVWIEAPIGYVSFTKQLGD-----IWKSYWLENTDDSKISHFIGKDITVHHAVFW 295
             +  YVW++APIGY+   K L D      +  +W +++  +++ HFIGKDI   H++FW
Sbjct: 247 PGKYFYVWLDAPIGYMGSFKNLCDKRPELSFDEFWAKDS-KAEVYHFIGKDIVYFHSLFW 305

Query: 296 PGILKGIGGYKMPNAVVSGGYLTLENKKMSTSKNWVVWVKDFVENFSSDYLRYFFMINAP 355
           P +L G  GY+ PN+V + GY+T+   KMS SK   +  + ++++   +YLRY++     
Sbjct: 306 PAMLYG-SGYRQPNSVYAHGYVTVNGAKMSKSKGTFIKARTYLDHLDPEYLRYYYAAKLS 364

Query: 356 LN-RDTDFSWDDFQKRINTELIDIIGNFTHRTLVFTERKFGSTPIVDLNQLKDEDKKLIS 414
               D D + +DF +R+N++L+  + N   RT  F  ++F      D    K  D  L  
Sbjct: 365 SRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFITKRF------DGKLAKITDTTLTE 418

Query: 415 KCDDTEKLVDSLIREYNFKDALMEIIHLAKEGNGYFQGMAPW-AIKNEERLKEVMYTCSV 473
                ++ +        +  A+ EI+ LA   NG+    APW  +K++++ +     CS 
Sbjct: 419 VFLAKQEQIAEFYETREYGKAMREIMALADIANGFVADAAPWQMVKHDDQQEAAHQVCSN 478

Query: 474 VL---KYIIYLLSSFMPEKTALLLEYMNEELDLKVRGNPLKKPKVIFTKVSDEDISRMKE 530
            L   + ++  L   +P     +  +  + L     G  +   ++   K   + +   K 
Sbjct: 479 ALNLFRILVTYLKPVLPRLAQDVEAFFQQTLTWDGLGQDMAGHEIAPFKAMMQRVELDKV 538

Query: 531 NLMKATKK----AETKSDEKSKKVKSGEKMDIIDIDYFGNIDLRVGQILEVEEVPRSKKL 586
           N M A  K    A T+ +     + +    D I+ + F  IDLR+ +I++ E V  + KL
Sbjct: 539 NAMVADSKENLQATTEPEAPKGPLATDPISDTINYEDFAKIDLRIARIVKAEHVAEADKL 598

Query: 587 YKIIADLGDEKRQIVSGLIGAYDAEELVGKKVIIICNLKPAKLCGVESQGMLLAA 641
            K+  D+G E RQ+ +G+  AY  E+L GK  +++ NL P K+    S+GM+LAA
Sbjct: 599 LKLQLDIGGETRQVFAGIKSAYSPEDLEGKLTVMVANLAPRKMRFGMSEGMVLAA 653