Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 639 a.a., ATP-dependent metalloprotease FtsH from Pseudomonas stutzeri RCH2

 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 40/238 (16%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG ++ K+ + E +E +        +GG+  + +L+ GPPG+GKT LA AIA +    
Sbjct: 158 DVAGCDEAKEEVHELVEFLRDPGKFQRLGGRIPRGVLMVGPPGTGKTLLAKAIAGEAKVP 217

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     D +   VG  A+       ++      +I +DE+D +          G
Sbjct: 218 FFTISGS-----DFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGG 272

Query: 112 NDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHTNSI 164
           +D+R      + V     +  +  +++ A    DV  PAL+        + VG       
Sbjct: 273 HDEREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGR 332

Query: 165 PPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGSIEIEDAKE 218
             +L    R++ + E  E    I +     SG DL   +N+    A   +  I + +E
Sbjct: 333 EQILKVHMRKVPISENVE-PAVIARGTPGFSGADLANLVNEASLFAARSNKRIVEMRE 389