Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 634 a.a., membrane protease FtsH catalytic subunit from Pseudomonas syringae pv. syringae B728a

 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 38/240 (15%)

Query: 12  SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63
           +L DVAG ++ K+ + E +E +        +GG+  + +L+ GPPG+GKT +A AIA + 
Sbjct: 152 TLADVAGCDEAKEEVGELVEFLRDPGKFQRLGGRIPRGVLMVGPPGTGKTLIAKAIAGEA 211

Query: 64  AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-------- 109
                 ++ S     D +   VG  A+       ++      +I +DE+D +        
Sbjct: 212 KVPFFTISGS-----DFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGM 266

Query: 110 -SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHT 161
             G+D+R      + V     +  +  +++ A    DV  PAL+        + VG    
Sbjct: 267 GGGHDEREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDI 326

Query: 162 NSIPPVLRRIALK--EGFEIDEKII-KMIASHSGGDLRAAINDLQSLATGGSIEIEDAKE 218
                +L+    K   G +++  +I +     SG DL   +N+    A      + + KE
Sbjct: 327 RGREQILKVHMRKVPMGEDVNPGVIARGTPGFSGADLANLVNEASLFAARSGKRVVEMKE 386