Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 632 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score = 45.8 bits (107), Expect = 4e-09
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 28/124 (22%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG  + K+ L E +  +        +G +  + +LL GPPG+GKT LA AIA +    
Sbjct: 169 DVAGIEEAKEELQEVVSFLRSSDRFTAVGARIPRGVLLVGPPGTGKTLLAKAIAGEAGVP 228

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     + +   VG  A+       K+      ++ +DE+D +          G
Sbjct: 229 FFSMSGS-----EFVEMFVGVGASRVRDLFRKAKENSPCIVFIDEIDAVGRQRGAGIGGG 283

Query: 112 NDDR 115
           ND+R
Sbjct: 284 NDER 287