Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 652 a.a., DNA polymerase III, tau subunit from Synechococcus elongatus PCC 7942

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 43/230 (18%)

Query: 7   KYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPI-LLAGPPGSGKTTLAY-------- 57
           KYRP+   D+ G    ++A+   +   +  Q   P  L  GP G+GKT+ A         
Sbjct: 9   KYRPQCFADLVG----QEAIARTLSQALAQQRIAPAYLFTGPRGTGKTSSARILAKSLNC 64

Query: 58  ------------------AIANDYAFDVIELNASDKRNKDVISQVVGTAATSKSLTGRRT 99
                             AIA   A DVIE++A+     D I +++  A  +  +  R  
Sbjct: 65  QQSTVPTASPCGECEACRAIARGNALDVIEIDAASNTGVDNIRELIERAQFA-PVQCRFK 123

Query: 100 LIVLDEVDGLSGNDDRGGVAEIIKVLKTAENP----VILTANDVYKPALMTLRNSVNLIN 155
           + V+DE   LS        A    +LKT E P    V + A    +  L T+ +     +
Sbjct: 124 VYVIDECHMLS-------TAAFNALLKTLEEPPDRVVFVLATTDPQRVLPTIISRCQRFD 176

Query: 156 VGSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSL 205
              +   ++   L+ IA KE  EI+   I ++A  + G LR A + L  L
Sbjct: 177 FRRIPLQAMTDHLQVIAQKESIEIEPTAIALVAQLAQGGLRDAESLLDQL 226