Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 645 a.a., metalloprotease transmembrane protein from Sinorhizobium meliloti 1021

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 60/247 (24%), Positives = 105/247 (42%), Gaps = 46/247 (18%)

Query: 12  SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63
           + +DVAG ++ KQ L E +E +        +GG+  + +LL GPPG+GKT LA ++A + 
Sbjct: 156 TFDDVAGVDEAKQDLEEIVEFLRDPQKFQRLGGRIPRGVLLVGPPGTGKTLLARSVAGEA 215

Query: 64  AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-------- 109
                 ++ S     D +   VG  A+       ++      +I +DE+D +        
Sbjct: 216 NVPFFTISGS-----DFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGL 270

Query: 110 -SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHT 161
             GND+R      + V     +  E  +++ A    DV  PAL+        + V +   
Sbjct: 271 GGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDI 330

Query: 162 NSIPPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGS------I 211
           N    +L    R + L    ++ + + +     SG DL   +N+   +A   +       
Sbjct: 331 NGRERILKVHVRNVPLAPNVDL-KVLARGTPGFSGADLMNLVNESALMAARRNKRLVTMQ 389

Query: 212 EIEDAKE 218
           E EDAK+
Sbjct: 390 EFEDAKD 396