Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 626 a.a., DNA polymerase III subunits gamma and tau from Sinorhizobium meliloti 1021

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 46/266 (17%)

Query: 7   KYRPKSLNDV-AGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAIANDYAF 65
           KYRPK  +D+  G     + L    E+   G+  +  +L G  G GKTT A  +A    +
Sbjct: 26  KYRPKDFSDLMVGQEPMVRTLTNAFET---GRIAQAYMLTGVRGVGKTTTARILARALNY 82

Query: 66  ----------------------------DVIELNASDKRNKDVISQVVGTAATSKSLTGR 97
                                       DVIE++A+     D I +++      + ++ R
Sbjct: 83  KTAEIDKPTIDLRVPGEHCQAIMDGRHVDVIEMDAASHTGIDDIREII-EQVRYRPVSAR 141

Query: 98  RTLIVLDEVDGLSGNDDRGGVAEIIKVLKTAENPV----ILTANDVYKPALMTLRNSVNL 153
             + ++DEV  LS     G       +LKT E P      + A    +   +T+ +    
Sbjct: 142 YKVYIIDEVHMLSTQAFNG-------LLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQR 194

Query: 154 INVGSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDL-QSLA-TGGSI 211
            ++  +  + +  +   I  KEG   D + + M+A  + G  R  ++ L Q++A  GGS+
Sbjct: 195 FDLRRISASDLVGLFSTILGKEGVPFDPEALAMVARAAEGSARDGLSLLDQAIAHGGGSV 254

Query: 212 EIEDAKELPDRDSEKSIFDAMRIIMK 237
           EIE  + +        I D    ++K
Sbjct: 255 EIETVRSMLGLADRARIVDLFEHVIK 280