Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 806 a.a., ATP-dependent protease LA protein from Sinorhizobium meliloti 1021

 Score = 45.1 bits (105), Expect = 9e-09
 Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 22/183 (12%)

Query: 15  DVAGHNKTKQALIEWIESIIGGQNQK-PIL-LAGPPGSGKTTLAYAIANDYAFDVIELNA 72
           D  G +K K+ ++E++         K PIL L GPPG GKT+LA +IA     + I +  
Sbjct: 326 DHFGLDKVKERIVEYLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMAL 385

Query: 73  SDKRN--------KDVISQVVGTAATS-KSLTGRRTLIVLDEVDGLSGNDDRGGVAE-II 122
              R+        +  I  + G    S K       L +LDE+D + G D RG  +  ++
Sbjct: 386 GGVRDEAEIRGHRRTYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKM-GQDFRGDPSSALL 444

Query: 123 KVLKTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPVL---RRIALKEGFEI 179
           +VL   +N   +   D Y      L    N++ + + +T +IPP L     +    G+  
Sbjct: 445 EVLDPEQNSTFM---DHYLEVEYDLS---NVMFITTANTLNIPPPLMDRMEVIRIAGYTE 498

Query: 180 DEK 182
           DEK
Sbjct: 499 DEK 501