Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 640 a.a., Peptidase M41, FtsH (NCBI) from Rhodospirillum rubrum S1H

 Score = 61.6 bits (148), Expect = 8e-14
 Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 48/254 (18%)

Query: 6   EKYRPKSLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAY 57
           EK    + +DVAG ++ KQ L E +E +        +GG+  K +LL GPPG+GKT LA 
Sbjct: 147 EKTGRVTFDDVAGIDEAKQELEEVVEFLRDPQKFQRLGGKIPKGVLLVGPPGTGKTLLAR 206

Query: 58  AIANDYAFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL-- 109
           AIA +       ++ S     D +   VG  A+       +       LI +DE+D +  
Sbjct: 207 AIAGEANVPFFTISGS-----DFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGR 261

Query: 110 -------SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALM---TLRNSVN 152
                   GND+R      + V     +  E  +++ A    DV  PAL+        V 
Sbjct: 262 HRGAGLGGGNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVT 321

Query: 153 LINVGSVHTNSIPPV-LRRIALKEGFEIDEKII-KMIASHSGGDLRAAINDLQSLATGGS 210
           + N   +    I  V +R+  L  G ++D K+I +     SG DL   +N+   LA    
Sbjct: 322 VSNPDIMGREKILKVHMRKTPL--GPDVDAKVIARGTPGFSGADLSNLVNEAALLAARKG 379

Query: 211 ------IEIEDAKE 218
                  E E+AK+
Sbjct: 380 KRVVTMAEFEEAKD 393