Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 609 a.a., ATP-dependent metalloprotease FtsH from Dechlorosoma suillum PS

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 63/250 (25%)

Query: 4   WVEKYRPKSLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTL 55
           ++EK    +  DVAG ++ K  L+E ++ +        +G +  K +LL GPPG+GKT L
Sbjct: 147 FMEKNTGVTFADVAGVDEAKAELVEIVDFLKNPQEYGRLGARIPKGVLLVGPPGTGKTLL 206

Query: 56  AYAIANDYAFDVIELNASD----------KRNKDVISQVVGTAATSKSLTGRRTLIVLDE 105
           A A+A + A     ++ S+           R +D+  Q  G A           +I +DE
Sbjct: 207 AKAVAGEAAVPFFSISGSEFVEMFVGVGAARVRDLFEQARGQAP---------AIIFIDE 257

Query: 106 VDGL----------SGNDDR------------GGVAEIIKVLKTAEN------PVILTAN 137
           +D L           G+D+R            G  + +  ++  A N        +L A 
Sbjct: 258 LDALGRARGVGGPIGGHDEREQTLNQLLTEMDGFDSSVGLIILAATNRPEILDQALLRAG 317

Query: 138 DVYKPALMTLRNSVNLINVGSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRA 197
              +  L+   +    +++  VH       ++++ L    ++ E++  +    SG DL  
Sbjct: 318 RFDRQVLVDRPDKKGRLDILKVH-------VKKVTLASDVDL-EQVAALTTGFSGADLAN 369

Query: 198 AINDLQSLAT 207
            +N+    AT
Sbjct: 370 LVNEAALAAT 379