Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 452 a.a., Conserved hypothetical alanine leucine valine rich protein from Mycobacterium tuberculosis H37Rv

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 28/259 (10%)

Query: 7   KYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAI--ANDYA 64
           + RP SL++V G +    A    +  ++ G     ++L GPPGSGKTTLA  I  A    
Sbjct: 34  RMRPASLDEVVGQDHLL-APGSPLRRLVEGSGVASVILYGPPGSGKTTLAALISQATGRR 92

Query: 65  FDVIE-LNASDKRNKDVISQVVGTAATSKSLTGRRTLIVLDEVDGLSGNDDRGGVAE--- 120
           F+ +  L+A  K  + VI       +    L G +T++ +DEV   S       ++    
Sbjct: 93  FEALSALSAGVKEVRAVIEN-----SRKALLHGEQTVLFIDEVHRFSKTQQDALLSAVEH 147

Query: 121 --IIKVLKTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPVLRRIALKEGFE 178
             ++ V  T ENP       +   +L+     +   +  +V   +I        L     
Sbjct: 148 RVVLLVAATTENPSFSVVAPLLSRSLILQLRPLTAEDTRAVVQRAIDDPR---GLGRAVA 204

Query: 179 IDEKIIKMIASHSGGDLRAAINDLQ-----SLATGGSIEIEDAKELPDRDSEKSIFDAMR 233
           +  + + ++   + GD R A+  L+     + A G  + ++  +   D+ + +   D   
Sbjct: 205 VAPEAVDLLVQLAAGDARRALTALEVAAEAAQAAGELVSVQTIERSVDKAAVRYDRDG-- 262

Query: 234 IIMKTTHYDIATSATRDVK 252
                 HYD+ ++  + V+
Sbjct: 263 ----DQHYDVVSAFIKSVR 277