Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 820 a.a., ATP-dependent protease La (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 14/172 (8%)

Query: 5   VEKYRPKSLNDVAGHNKTKQALIEW--IESIIGGQNQKPILLAGPPGSGKTTLAYAIAND 62
           +EK R     D  G  K K+ ++E+  ++ ++       + L GPPG GKT+LA ++A  
Sbjct: 322 IEKARTVLDADHYGLEKPKERILEYLAVQKLVNRLKGPILCLVGPPGVGKTSLAKSVAKA 381

Query: 63  YAFDVIELNASDKRN--------KDVISQVVGTAATS-KSLTGRRTLIVLDEVDGLSGND 113
              + + L+    R+        +  +  + G    S K +     L  LDE+D +S + 
Sbjct: 382 TGREFVRLSLGGVRDEAEIRGHRRTYVGALPGKIIQSLKRVKFNNPLFCLDEIDKMSMDF 441

Query: 114 DRGGVAEIIKVLKTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIP 165
                A +++VL   +N    T ND Y      L     +    S+H+  +P
Sbjct: 442 RGDPSAALLEVLDPEQNN---TFNDHYLDMDYDLSQVFFITTANSLHSIPLP 490