Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 445 a.a., ATPase, AAA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 11/182 (6%)

Query: 42  ILLAGPPGSGKTTLAYAIANDYAFDVIELNASDKRNKDVISQVVGTAATSKSLTGRRTLI 101
           ++L GPPG+GKTTLA  IA+     V  ++A     KD+   +    A ++S  G+RTL+
Sbjct: 54  MMLWGPPGTGKTTLAELIAHYSNAHVERISAVTSGVKDIRGAIEQAQAIAQS-RGQRTLL 112

Query: 102 VLDEVDGLSGNDDRGGV-----AEIIKVLKTAENPVILTANDVYKPALMTLRNSVNLINV 156
            +DEV   + +     +       +I +  T ENP     N +   A + L   ++   +
Sbjct: 113 FVDEVHRFNKSQQDAFLPFIEDGTVIFIGATTENPSFEINNALLSRARVYLIKRLSQDEI 172

Query: 157 GSVHTNSIPPVLRRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQ----SLATGGSIE 212
             + T ++    R +  +    +   ++  +A    GD R A+N L+     +A GG+  
Sbjct: 173 VHIITQALADTERGLG-QRALNMPTDVLNKLAQLCDGDARKALNLLELMSDMVADGGTFT 231

Query: 213 IE 214
            E
Sbjct: 232 TE 233