Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 649 a.a., cell division protein FtsH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 49.3 bits (116), Expect = 4e-10
 Identities = 59/253 (23%), Positives = 104/253 (41%), Gaps = 41/253 (16%)

Query: 15  DVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDYAFD 66
           DVAG ++ K+ + E ++ +        +GG+    +L+ GPPG+GKT LA AIA +    
Sbjct: 155 DVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVP 214

Query: 67  VIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL---------SG 111
              ++ S     D +   VG  A+       ++      +I +DE+D +          G
Sbjct: 215 FFTISGS-----DFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAGLGGG 269

Query: 112 NDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHTNSI 164
           +D+R      + V     +  E  +++ A    DV   AL+        + VG       
Sbjct: 270 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGR 329

Query: 165 PPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAINDLQSLATGGSIEIEDAKELP 220
             +L    R++ L E  +    I +     SG DL   +N+    A  G+  +   +E  
Sbjct: 330 EQILKVHMRKVPLSEDVKA-SVIARGTPGFSGADLANLVNEAALFAARGNRRVVGMEEF- 387

Query: 221 DRDSEKSIFDAMR 233
           +R  +K +  A R
Sbjct: 388 ERAKDKIMMGAER 400