Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 411 a.a., ATPase, AAA family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 42/257 (16%)

Query: 6   EKYRPKSLNDVAGHNKTKQALIEWIESIIGGQNQKPILLAGPPGSGKTTLAYAIANDYAF 65
           E+ RP  L    G     Q     IE+++       +LL GPPG GK+TLA  +A   + 
Sbjct: 9   ERLRPTVLEGFVGQTHLTQR----IEALLRANRLPSLLLFGPPGCGKSTLALLLAKARSA 64

Query: 66  DVIELNASDKRNKDVISQVVGTAATSKSLTGRRTLIVLDEVDGLSGNDDRGGVAEIIKVL 125
           +V+ L+A +   + +  Q+ G             ++VLDE+   S    +      + +L
Sbjct: 65  NVLRLSAPEAGLQHLRKQLHGV-----------DILVLDELHRFS----KAQQDFFLPLL 109

Query: 126 KTAENPVILTANDVYKPALMTLRNSVNLINVGSVHTNSIPPVL---RRIALKEGFEIDEK 182
           ++ +  ++ T  +   P+    R  ++ ++V  +       +L   RR A+ +  +I++ 
Sbjct: 110 ESGDITMLATTTE--NPSFSVTRQLLSRLHVLRLRPLGRAELLELGRRGAVAQEVQIEDD 167

Query: 183 IIKMIASHSGGDLRAAINDLQSLATGGSIEIEDAKELP-DRDSEKSIFDAMRIIMK---- 237
           ++ ++AS S GD R  +N L+ +A            LP D+   + +  AM  I+     
Sbjct: 168 VLDLLASMSHGDARTMLNLLEYVAA-----------LPEDKRDIEGVRSAMPEIVSRHDK 216

Query: 238 --TTHYDIATSATRDVK 252
               HY++A++  + ++
Sbjct: 217 DGDNHYELASALIKSIR 233