Pairwise Alignments

Query, 486 a.a., replication factor C large subunit from Methanococcus maripaludis S2

Subject, 656 a.a., cell division protein FtsH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.5 bits (140), Expect = 7e-13
 Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 40/224 (17%)

Query: 12  SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63
           +  DVAG ++ K+ L E +E +        +GG+  K +LL GPPG+GKT LA A+A + 
Sbjct: 151 TFEDVAGVDEAKEELSEVVEFLSNPRKFTRLGGRIPKGVLLVGPPGTGKTLLARAVAGEA 210

Query: 64  AFDVIELNASDKRNKDVISQVVGTAAT---SKSLTGRRT---LIVLDEVDGL-------- 109
                 ++ S     D +   VG  A+      + G++    LI +DE+D +        
Sbjct: 211 GVPFFSISGS-----DFVEMFVGVGASRVRDLFMQGKKNAPCLIFIDEIDAVGRQRGAGL 265

Query: 110 -SGNDDRGGVAEIIKV----LKTAENPVILTAN---DVYKPALMTLRNSVNLINVGSVHT 161
             G+D+R      + V     ++ E  +++ A    DV  PAL+        + V +   
Sbjct: 266 GGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPTPDV 325

Query: 162 NSIPPVL----RRIALKEGFEIDEKIIKMIASHSGGDLRAAIND 201
                +L    RR  L  G  + E I K     SG DL   +N+
Sbjct: 326 RGRKRILEVHGRRTPLSSGVNL-EIIAKGTPGFSGADLENLVNE 368