Pairwise Alignments

Query, 550 a.a., dihydroxy-acid dehydratase from Methanococcus maripaludis S2

Subject, 578 a.a., L-arabonate dehydratase (EC 4.2.1.25) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  312 bits (799), Expect = 3e-89
 Identities = 200/543 (36%), Positives = 305/543 (56%), Gaps = 20/543 (3%)

Query: 16  RALLKACGYTDEDME-KPFIGIVNSFTEVVPGHIHLRTLSEAAKHGVYANGGTPFEFNTI 74
           R+ +K  G  D     KP IGI N+++E+ P + H R ++E  K GV   GG P EF   
Sbjct: 25  RSWMKNQGIADHQFHGKPIIGICNTWSELTPCNAHFRQIAEHVKRGVIEAGGFPVEFPVF 84

Query: 75  GICDGIAMGHEGMK-YSLPSREIIADAVESMARAHGFDGLVLIPTCDKIVPGMIMGALRL 133
                 + G   ++  ++ +R + +  VE   R +  DG+VL+  CDK  P ++MGA   
Sbjct: 85  ------SNGESNLRPTAMLTRNLASMDVEEAIRGNPIDGVVLLTGCDKTTPALLMGAASC 138

Query: 134 NIPFIVVTGGPMLPGEFQGKKYELISLFEGVGEY-QVGKITEEELKCIEDCACSGAGSCA 192
           ++P IVVTGGPML G+ +G+     ++   + E  + G IT ++    E      AG+C 
Sbjct: 139 DVPAIVVTGGPMLNGKHKGQDIGSGTVVWQLSEQVKAGTITIDDFLAAEGGMSRSAGTCN 198

Query: 193 GLYTANSMACLTEALGLSLPMCATTHAVDAQKVRLAKKSGSKIVDMVKEDLKPTDILTKE 252
            + TA++MAC+ EALG SLP  A   AVDA++  LA  SG + V+MV+EDLK + ILTKE
Sbjct: 199 TMGTASTMACMAEALGTSLPHNAAIPAVDARRYVLAHMSGMRAVEMVREDLKLSKILTKE 258

Query: 253 AFENAILVDLALGGSTNTTLHIPAIANEIENKFITLDDFDRLSDEVPHIASIKPGGEHYM 312
           AFENAI V+ A+GGSTN  +H+ AIA  I  + + LDD+ R+   +P I  ++P G   M
Sbjct: 259 AFENAIRVNAAIGGSTNAVIHLKAIAGRIGVQ-LDLDDWTRIGRGMPTIVDLQPSGRFLM 317

Query: 313 IDLHNAGGIPAVLNVLKE----KIRDTKTVDGRSILEIAESVKYINYD-VIRKVEAPVHE 367
            + + AGG+PAVL  L E       +  TV G+SI E  +       D VIR ++ P+  
Sbjct: 318 EEFYYAGGLPAVLRRLGEANLIPHPNALTVSGKSIGENTKDAPIYGQDEVIRTLDNPIRA 377

Query: 368 TAGLRVLKGNLAPNGCVVKIGAVHPKMYKHDGPAKVYNSEDEAISAILGGK--IVEGDVI 425
             G+ VL+GNLAP G V+K  A   ++ +H G A V+ + DE  + I   +  +    ++
Sbjct: 378 DGGICVLRGNLAPLGAVLKPSAATAELMQHRGRAVVFENFDEYKARINDPELDVDASSIL 437

Query: 426 VIRYEGPSGGPGMREM--LSPTSAICGMGLDDSVALITDGRFSGGSRGPCIGHVSPEAAA 483
           V++  GP G PGM E+  +   + +   G+ D V  I+D R SG + G  + HV+PEAAA
Sbjct: 438 VMKNCGPKGYPGMAEVGNMGLPAKLLAQGVTDMVR-ISDARMSGTAYGTVVLHVAPEAAA 496

Query: 484 GGVIAAIENGDIIKIDMIEKEINVDLDESVIKERLSKLGEFEPKIKKGYLSRYSKLVSSA 543
           GG +AA++ GD I++D     +++D+ ++ +  RL+ +   +  +  GY   Y   V  A
Sbjct: 497 GGPLAAVKEGDWIELDCTSGRLHLDIPDAELAARLADIVPPQQLLVGGYRQLYIDHVLQA 556

Query: 544 DEG 546
           D+G
Sbjct: 557 DQG 559