Pairwise Alignments

Query, 550 a.a., dihydroxy-acid dehydratase from Methanococcus maripaludis S2

Subject, 619 a.a., dihydroxy-acid dehydratase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  416 bits (1070), Expect = e-120
 Identities = 249/594 (41%), Positives = 334/594 (56%), Gaps = 62/594 (10%)

Query: 16  RALLKACGYTDEDMEKPFIGIVNSFTEVVPGHIHLRTLSEAAKHGVYANGGTPFEFNTIG 75
           RAL +A G  D D  KP I I NSFT+ VPGH+HL+ +       +   GG   EFNTI 
Sbjct: 19  RALWRATGVKDNDFGKPIIAIANSFTQFVPGHVHLKDMGSLVASAIEEAGGIAKEFNTIA 78

Query: 76  ICDGIAMGHEGMKYSLPSREIIADAVESMARAHGFDGLVLIPTCDKIVPGMIMGALRLNI 135
           + DGIAMGH GM YSLPSRE+IAD+VE M  AH  D LV I  CDKI PGM+M ALRLNI
Sbjct: 79  VDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNI 138

Query: 136 PFIVVTGGPMLPGEFQ-GKKYELISLFEGVGEYQVGKITEEELKCIEDCACSGAGSCAGL 194
           P + V+GGPM  G+ +   K   + L + +       +++E+   IE  AC   GSC+G+
Sbjct: 139 PVVFVSGGPMEAGKTKLSDKLIKLDLVDAMVAAADSSVSDEDSAKIERSACPTCGSCSGM 198

Query: 195 YTANSMACLTEALGLSLPMCATTHAVDAQKVRLAKKSGSKIVDMVKE-------DLKPTD 247
           +TANSM CLTEALGLSLP   +  A  + +  L  ++G +++ + K           P +
Sbjct: 199 FTANSMNCLTEALGLSLPGNGSMLATHSDRRELFLEAGRRVMALTKRYYEQDDTSALPRN 258

Query: 248 ILTKEAFENAILVDLALGGSTNTTLHIPAIANEIENKFITLDDFDRLSDEVPHIASIKPG 307
           I   +AFENA  +D+A+GGS+NT LH+ A A E E  F T+DD DR+S  VPH+  + P 
Sbjct: 259 IACFKAFENATALDIAMGGSSNTVLHLLAAAQEAEVAF-TMDDIDRMSRLVPHLCKVAPS 317

Query: 308 -GEHYMIDLHNAGGIPAVLNVL--------------------------KEKIRDTKTVDG 340
             +++M D+H AGG+  +L  L                          K  +  T+  + 
Sbjct: 318 TPKYHMEDVHRAGGVMGILGELDRAGLLHTDVPHVAADAGGNLKSVLAKYDVMQTQDDNV 377

Query: 341 RSIL-----------EIAESVKYINYD------VIRKVEAPVHETAGLRVLKGNLAPNGC 383
           +                ++  ++ + D       IR  E    +  GL VL GNLA NGC
Sbjct: 378 KQFFMAGPAGIPTTKAFSQDCRWPSLDDDRREGCIRSREFAFSQEGGLAVLSGNLAENGC 437

Query: 384 VVKIGAVHPKMYKHDGPAKVYNSEDEAISAILGGKIVEGDVIVIRYEGPSGGPGMREMLS 443
           +VK   V        G A+VY S+D+A++ ILGG++V GDV+VIRYEGP GGPGM+EML 
Sbjct: 438 IVKTAGVDESNLIFVGSARVYESQDDAVAGILGGEVVAGDVVVIRYEGPKGGPGMQEMLY 497

Query: 444 PTSAICGMGLDDSVALITDGRFSGGSRGPCIGHVSPEAAAGGVIAAIENGDIIKIDMIEK 503
           PTS +   GL  + ALITDGRFSGG+ G  IGHVSPEAAAGG IA IENGD I+ID+  +
Sbjct: 498 PTSYLKSRGLGKACALITDGRFSGGTSGLSIGHVSPEAAAGGTIALIENGDRIEIDIPAR 557

Query: 504 EINVDLDESVIKERLSKLGEFEPKIKKGY---------LSRYSKLVSSADEGAV 548
            I + + ++ +  R   +    P   K           L  Y+ L +SAD+GAV
Sbjct: 558 SIKLAVSDAELAGRRETMLARGPMAWKPVGRERFVSMALKAYAMLATSADKGAV 611