Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 1156 a.a., branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data) from Pseudomonas stutzeri RCH2

 Score =  114 bits (284), Expect = 3e-29
 Identities = 160/628 (25%), Positives = 264/628 (42%), Gaps = 86/628 (13%)

Query: 19  AAGLQFG---AGYPGTPSTEVMETLIKNA---KKYNYYVEWSTNEKVALETAI------- 65
           A GL  G   +GY G+P   + ++L +     K++  + +   NE++A  TA+       
Sbjct: 40  ARGLNTGGFISGYRGSPLGGLDKSLWEARDYLKQHAIHFQPGVNEELAA-TAVWGSQQTN 98

Query: 66  ---GASFSGASSIVTMKQVGLNVASDPLMSLTYLGI--KGPLVLLVTDDPGPHSSQTEQD 120
              GA + G  ++   K  G++ A D        G+  +G ++LL  DD G  SS     
Sbjct: 99  LFPGAKYDGVFAMWYGKGPGVDRAGDVFKHANAAGVSPQGGVLLLAGDDHGCKSSTLPHQ 158

Query: 121 TRSFGLFSNIPVLDPSNSQEAYEMTKYAFKISKEYETPVILRTTTRVSHRCDDVVLEELK 180
           +    + ++IPVL+P+N QE  +     +++S+     V L+T          V ++ L+
Sbjct: 159 SEHAFIAASIPVLNPANVQEILDYGIIGWELSRYSGCWVALKTIAENVDSSAVVEVDPLR 218

Query: 181 -----PSDENIEEFSKSSRWAIFPKLTAERHPILEKLQ--KTLSNKFSDSKFNFKTGTGK 233
                P D  + E     RW   P L  E+   L K+   +  +   + ++    +   +
Sbjct: 219 VQTRIPEDFELPEDGVHIRWPD-PPLAQEKRLNLYKIYAARAFARANNLNRVMLDSPNPR 277

Query: 234 IGIITSGASYHYVNEAISN---NKELFS-----VLKIGTPHPFPENKVIEFTNEVDSIIV 285
           +GIIT+G SY  V +A+ +   ++ L +     VLK+G   P     V EF   +D I+V
Sbjct: 278 LGIITTGKSYLDVRQALDDLGLDEALCASVGLRVLKVGMSWPLEPVSVHEFAQGLDEILV 337

Query: 286 VEELDSYLEDQLLQLLGKQGILK--PIYG----KKNNIFPCCGEYSVDIVKIGINKVL-- 337
           VEE  S +EDQL   L    + K   + G    + N++ P   E +  ++   I K L  
Sbjct: 338 VEEKRSIIEDQLTGQLYNWPVSKRPRVVGEFDEQGNSLLPNLSELTPAMIARVIAKRLAP 397

Query: 338 ----DSL--KLQKLEISEKLIDKNDIIPLPVRPPNLCAGCMHRTVFYAFKEVSKELKKHN 391
               DS+  +L  L   EK +         VR P+ C+GC H +      E S+      
Sbjct: 398 IYTSDSIQARLAFLAAKEKALAARSY--STVRTPHYCSGCPHNS-STKVPEGSRA----- 449

Query: 392 IQTIFSGDIGCYTLGNAPPLELIDTCLCMGAGISIAGGISRTTKNSKNVAFIGDSTFFHS 451
                S  IGC+ +               G G++  G  +  T        +GD T+FHS
Sbjct: 450 -----SAGIGCHYMVQWMDRRTETFTQMGGEGVNWIGQ-APFTDTPHMFQNLGDGTYFHS 503

Query: 452 GIPAVINAVYNNADVTIAVLDNRTTAMTGHQPHPGTGKTALGKPTKLIDIEGILKSCGV- 510
           G  AV  AV    +VT  +L N   AMTG QP    G+  + + ++ I  EG+ +   V 
Sbjct: 504 GSLAVRAAVAAGVNVTYKILYNDAVAMTGGQPI--DGELRVDQLSRQIFHEGVKRIALVS 561

Query: 511 -EFVKTVSADDFSACKE---------ISKEVIEYNGPSAVVFRGNCVS----------LV 550
            E  K  S D F+             + +E+ E+ G S +++   C +          + 
Sbjct: 562 DEPDKYPSRDTFAPITSFHHRRELDAVQRELREFKGVSVIIYDQTCATEKRRRRKRGKME 621

Query: 551 KSDKKYVIDKNKCINCKICVERLGCPAI 578
              K+  I+   C  C  C E+  C A+
Sbjct: 622 DPAKRAFINPAVCEGCGDCGEKSNCLAV 649