Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 607 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Rhodopseudomonas palustris CGA009

 Score =  419 bits (1078), Expect = e-121
 Identities = 248/612 (40%), Positives = 357/612 (58%), Gaps = 46/612 (7%)

Query: 7   LMGNEAIAYGAIAAGLQFGAGYPGTPSTEVMETLIKNAKKYNYYVEWSTNEKVALETAIG 66
           L GNEAIA  A  AG++  A YPGTPSTEV+E L     + + + +WSTNEKVAL+ A+G
Sbjct: 21  LTGNEAIARAAWEAGVRVAAAYPGTPSTEVLENLATYPVE-DLHAQWSTNEKVALDVAMG 79

Query: 67  ASFSGASSIVTMKQVGLNVASDPLMSLTYLGIKGPLVLLVTDDPGPHSSQTEQDTRSFGL 126
           ASF+G+ ++  MK VGLNVA+D  M+ TY+G+ G LVL+V DDPG HSSQ EQD+R +G 
Sbjct: 80  ASFAGSRALCAMKHVGLNVAADAFMTATYIGVNGGLVLIVCDDPGIHSSQNEQDSRIYGQ 139

Query: 127 FSNIPVLDPSNSQEAYEMTKYAFKISKEYETPVILRTTTRVSHRCDDVVLEELKPSDENI 186
            ++IPVL+PS++QEAY+ TK AF+IS++++TPVI+R+TTR+SH    V + E       +
Sbjct: 140 LASIPVLEPSDAQEAYDFTKLAFEISEQFDTPVIVRSTTRLSHTRSTVSVGERVEMPPRV 199

Query: 187 EEFSKSSRWAIFPKLTAERHP-ILEKLQKTLSNKFSDSKFNFKTGTGKIGIITSGASYHY 245
               + S+  + P     RH  +LE+  K      +      + G  K G++T+G  Y Y
Sbjct: 200 -FLERPSKNVMIPAHARGRHLFVLEREAKLKDYLATADITRVEKGDTKFGVVTAGTCYPY 258

Query: 246 VNEAISNNKELFSVLKIGTPHPFPENKVIEFTNEVDSIIVVEELDSYLEDQLLQLLGKQG 305
           + E + N     +VLK+G   P P+  + EF   VD + VVEEL+  +E ++  L    G
Sbjct: 259 LREVLPN----ATVLKLGASWPLPDTLLREFCASVDQVFVVEELEPIIEKEVASL----G 310

Query: 306 ILKPIYGKKNNIFPCCGEYSVDIVKIGINKVLDSLKLQKLEISEKLIDKNDIIPLP-VRP 364
           I   + GK+  +FP  GE+S ++V+ G           +  +       N  +P P VRP
Sbjct: 311 I--KVEGKR--LFPRAGEFSPEVVRAG---------FVQAGLLPAPPSYNAWVPEPVVRP 357

Query: 365 PNLCAGCMHRTVFYAFKEVSKELKKHNIQTIFSGDIGCYTLGNAPPLELIDTCLCMGAGI 424
           P LCAGC H + F A +     +         +GDIGCYTL    PL  IDTC+ MG+ I
Sbjct: 358 PVLCAGCPHTSSFLAVRASGARV---------AGDIGCYTLAVLDPLRGIDTCVAMGSSI 408

Query: 425 SIAGGISRTTKNSKNVAFIGDSTFFHSGIPAVINAVYNNADVTIAVLDNRTTAMTGHQPH 484
             A G+++  +    VA IGDSTF H+G+PA+I+AVYN A++ + +LDN  TAMTG Q H
Sbjct: 409 GNAIGMAKAGEAKPVVATIGDSTFLHAGLPALIDAVYNQANIAVVLLDNHITAMTGGQEH 468

Query: 485 PGTGKTALGKPTKLIDIEGILKSCGVEFVKTVSADDFSACKEISKEVIEYNGPSAVVFRG 544
           PGTGKT  G+P   +D E ++K+CGV++VK V + D +A  +  +E I Y G + ++   
Sbjct: 469 PGTGKTLRGEPAPQVDYEALIKACGVKWVKKVDSYDLAATHQALREAINYRGVAVLISNR 528

Query: 545 NCV---SLVKSDKKYVIDKNKCINCKICVERLGCPAITMNDEIPEIMDN-------CTGC 594
            CV     +K     +I  ++C  C+ C+  LGCPA+T +DE  E           C GC
Sbjct: 529 PCVLDPIKIKGPPLEII-TSQCTACQSCM-NLGCPALTWSDEWFEGRHRVKIDPALCIGC 586

Query: 595 GLCKAVCPANAV 606
            LC  VC  + +
Sbjct: 587 TLCAQVCTIDCI 598