Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 578 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis JJ

 Score =  456 bits (1174), Expect = e-133
 Identities = 267/620 (43%), Positives = 370/620 (59%), Gaps = 55/620 (8%)

Query: 4   KHFLMGNEAIAYGAIAAGLQFGAGYPGTPSTEVMETLIKNAKKYNYYVEWSTNEKVALET 63
           K  ++GNEA+A GA  AG+     YPGTPSTE+ E ++K  +  +   EWS NEKVALE 
Sbjct: 2   KKLMLGNEAVARGAYEAGVLVATAYPGTPSTEITEHIVKYPEINS---EWSVNEKVALEV 58

Query: 64  AIGASFSGASSIVTMKQVGLNVASDPLMSLTYLGIKGPLVLLVTDDPGPHSSQTEQDTRS 123
           AIG++ +GA ++V+MK VGLNVA+DPLM++ Y GI   L+++V DDP  HSSQ EQDTR 
Sbjct: 59  AIGSAIAGARTVVSMKHVGLNVAADPLMTVAYTGINAGLLIIVADDPSMHSSQNEQDTRY 118

Query: 124 FGLFSNIPVLDPSNSQEAYEMTKYAFKISKEYETPVILRTTTRVSHRCDDVVLEELKPSD 183
           +G+F+ IPVL+PS+SQE  +  K   +IS++++TPVILR +TRVSH    V LEE +  +
Sbjct: 119 YGMFAKIPVLEPSDSQECKDFVKLGLEISEKFDTPVILRLSTRVSHSQSLVELEEKEKIE 178

Query: 184 ENIEEFSKSSRWAIFPKLTAERHPILEKLQKTLSNKFSDSKFN-FKTGTGKIGIITSGAS 242
             + +++  S++   P    +R   +E+    LSN    S  N  +    KIGIITSG +
Sbjct: 179 LKLYDYN-PSKYVSAPANAKKRRIFIEERLNELSNFADSSDINKIEYTNKKIGIITSGVA 237

Query: 243 YHYVNEAISNNKELFSVLKIGTPHPFPENKVIEFTNEVDSIIVVEELDSYLEDQL----L 298
           Y+Y  EA+S+     S LK G  +P PE K+ EF    D + V EEL+   E ++    L
Sbjct: 238 YNYAKEAVSD----ASFLKFGMSYPLPEEKIKEFVQNCDKVYVFEELEPIFEQKIRSIGL 293

Query: 299 QLLGKQGILKPIYGKKNNIFPCCGEYSVDIVKIGINKVLDSLKLQKLEISEKLIDKNDII 358
            ++GK+            IFP  GE S +I++   N +L+  K+        +I+K  I 
Sbjct: 294 NVIGKE------------IFPVVGELSSEIIR---NALLNESKI--------VIEK--IE 328

Query: 359 PLPVRPPNLCAGCMHRTVFYAFKEVSKELKKHNIQTIFSGDIGCYTLGNAPPLELIDTCL 418
            LP RPP LC GC HR  FY    V K+LK H      +GDIGCYTLG   PL  IDT +
Sbjct: 329 GLPQRPPVLCPGCHHRGPFY----VLKKLKLH-----VAGDIGCYTLGGFEPLNAIDTTI 379

Query: 419 CMGAGISIAGGISRTTKN---SKNVAFIGDSTFFHSGIPAVINAVYNNADVTIAVLDNRT 475
           CMGA I +A G           K+VA IGDSTF+HSG+  +I+ VYN    T+ +LDN  
Sbjct: 380 CMGASIGMAHGFEMARGKDFAKKSVAVIGDSTFWHSGVTGLIDIVYNKGHSTVIILDNSI 439

Query: 476 TAMTGHQPHPGTGKTALGKPTKLIDIEGILKSCGVEFVKTVSADDFSACKEISKEVIEYN 535
           TAMTGHQ +P TGKT  G+ T  ID E + +S G+  ++ V A D  A +E  KE +   
Sbjct: 440 TAMTGHQENPSTGKTLSGESTNQIDFEALGRSIGINRIRVVDAYDLKALEETIKEEVNAE 499

Query: 536 GPSAVVFRGNCVSL--VKSD-KKYVIDKNKCINCKICVERLGCPAITMNDEIPEIMDN-C 591
            PS ++ +  CV +  VK D K Y ID   C  CK+C+ + GCPAI+ + ++ +I D+ C
Sbjct: 500 EPSLIITKRPCVLIKGVKFDFKDYKIDPELCTGCKLCL-KAGCPAISFDGKVAKINDSLC 558

Query: 592 TGCGLCKAVCPANAVIEVTK 611
            GCGLCK +C  +A++EV K
Sbjct: 559 VGCGLCKDLCKFSAIVEVVK 578