Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 616 a.a., indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  398 bits (1023), Expect = e-115
 Identities = 231/606 (38%), Positives = 339/606 (55%), Gaps = 22/606 (3%)

Query: 4   KHFLMGNEAIAYGAIAAGLQFGAGYPGTPSTEVMETLIKNAKKYNYYVEWSTNEKVALET 63
           +H L+GNEAI  GA+ AG+     YPGTPS+EV +T  +      Y +E+S NEKVALE 
Sbjct: 13  RHLLLGNEAIVRGALEAGINVVTCYPGTPSSEVPDTFRRIGGDGRYRLEYSVNEKVALEV 72

Query: 64  AIGASFSGASSIVTMKQVGLNVASDPLMSLTYLGIKGPLVLLVTDDPGPHSSQTEQDTRS 123
             GA+ +GA ++VTMK VG+NVA+DPL+++TY G+ G LVLL  DDPG HSSQ EQD R+
Sbjct: 73  GAGAALAGALTLVTMKHVGVNVAADPLLTMTYTGLPGGLVLLSADDPGCHSSQNEQDNRT 132

Query: 124 FGLFSNIPVLDPSNSQEAYEMTKYAFKISKEYETPVILRTTTRVSHRCDDVVLEELKPSD 183
           +  F+ +P  +P+ +QEA +M + A  +S+E + PV+LRTTTRV+H    V    L P  
Sbjct: 133 YARFAGMPCFEPATAQEAKDMAREALLLSRETQQPVLLRTTTRVNHLRGGVTYGAL-PEP 191

Query: 184 ENIEEFSKS-SRWAIFPKLTAERHPILEKLQKTLSNKFSDSKFNFKTGTGKIGIITSGAS 242
             +  F ++  R+   P +   RH     +   ++   S S +N   G G+IG+I SG S
Sbjct: 192 AAVVPFERNPRRFVPVPAVARARHFAQADVLGRVAELASASPWNTVHGEGRIGVIASGIS 251

Query: 243 YHYVNEAISNN--KELFSVLKIGTPHPFPENKVIEFTNEVDSIIVVEELDSYLEDQLLQL 300
             Y+ +A+     +    VL++G   P PE  +++F +  D ++V+EEL+  LE  +  L
Sbjct: 252 RAYLADALHERGLEGRVKVLELGFTWPLPERLLVDFLSGCDKVLVLEELEPLLERDVRAL 311

Query: 301 LGKQGILKPIYGKKNNIFPCCGEYSVDIVKIGINKVLDSLKLQKLEISEKLIDKNDIIPL 360
           + + G+   + G K  +    GEYS  IV   ++  L       ++ S         + L
Sbjct: 312 VQRLGLGVDVTG-KGGVLTVFGEYSTTIVGDALSAFLGETPAAPVQCSPDAAS----MEL 366

Query: 361 PVRPPNLCAGCMHRTVFYAFKEVSKELKKHNIQTIFSGDIGCYTLGNAPPLELIDTCLCM 420
           P+RPPNLCAGC HR V+YA ++V  +         +S DIGCYTLG  PPL + D   CM
Sbjct: 367 PMRPPNLCAGCSHRAVYYAVRKVFGD------DAYYSSDIGCYTLGLLPPLSMADFLFCM 420

Query: 421 GAGISIAGGISRTTKNSKNVAFIGDSTFFHSGIPAVINAVYNNADVTIAVLDNRTTAMTG 480
           G+ IS   G +        VA+IGDSTFFHSGI  + NA++N  DV + +LDN TTAMTG
Sbjct: 421 GSSISSGSGFA-AASGRPVVAYIGDSTFFHSGITGLANALFNKHDVLVVILDNGTTAMTG 479

Query: 481 HQPHPGTGKTALGKPTKLIDIEGILKSCGVEFVKTVSADDFSACKEISKEVIEYNGPSAV 540
           HQP+PG     LG     +DIE I++ CGVE V TV   +  A     +++ +  G   +
Sbjct: 480 HQPNPGVDAAVLGDACLHLDIEAIVRGCGVEQVATVHPYNLKATMAALEDMKQRTGVRVI 539

Query: 541 VFRGNCV-----SLVKSDKKYVIDKNKCINCKICVERLGCPAITMN-DEIPEIMDNCTGC 594
           + +  CV     +L K+ ++      +    + C+  L CPA   +  +I    + C+GC
Sbjct: 540 IAQEPCVLYARRTLKKAARQTAYVAEQGPEVEACLAELACPAFRRDGQDIAIDSEQCSGC 599

Query: 595 GLCKAV 600
            +C  V
Sbjct: 600 MVCLQV 605