Pairwise Alignments

Query, 612 a.a., indolepyruvate ferredoxin oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 1146 a.a., pyruvate ferredoxin/flavodoxin oxidoreductase family protein from Caulobacter crescentus NA1000

 Score = 59.3 bits (142), Expect = 9e-13
 Identities = 120/576 (20%), Positives = 222/576 (38%), Gaps = 87/576 (15%)

Query: 66  GASFSGASSIVTMKQVGLNVASDPLMSLTYLGI--KGPLVLLVTDDPGPHSSQTEQDTRS 123
           GA + G   +   K  G++   D      + G    G ++ +  DD G  SS     +  
Sbjct: 102 GALYDGVFGMWYGKAPGVDRTGDVFKHANFAGTFPTGGVLAVAGDDHGCKSSTLPSQSEF 161

Query: 124 FGLFSNIPVLDPSNSQEAYEMTKYAFKISK--EYETPVILRTTTRVSHRCDDVVLEE--- 178
                 +PVL P++ QE  +       +S+     T +I    T  S    DV L+    
Sbjct: 162 AFQDFEMPVLSPADVQEVLDYGLLGISMSRFSGLWTGMIALADTMDSGVTIDVSLDRHQI 221

Query: 179 -------------LKPSDENIEEFSKSSRWAIFPKLTAERHPILEKLQKTLSNKFSDSKF 225
                        ++  D+ +E+  +     I   L   R   ++++    S+       
Sbjct: 222 VVPEFAFPPGGLGIRQKDQPMEKERRMRLHKIPAALAFARANNIDRVVLGASH------- 274

Query: 226 NFKTGTGKIGIITSGASYHYVNEA-------ISNNKEL-FSVLKIGTPHPFPENKVIEFT 277
             K G  ++GI+  G +Y  V EA       +    +L  S+ K+G P P     +  F 
Sbjct: 275 -VKVGKARLGIVCQGQAYKDVLEAFTAMGMTLQEAADLGVSIYKVGMPWPLEPLGLRAFA 333

Query: 278 NEVDSIIVVEELDSYLEDQLLQLL------GKQGILKPIYGKKNNIFPCCGEYSVDIVKI 331
             +++++V+E   + +E Q    L       +  ++     K   +    G  SV  + +
Sbjct: 334 AGLETLMVIEHKRALIEPQARAALYDLPAQARPRVIGKTDEKGGPLLSELGSLSVAEIAL 393

Query: 332 GI-NKVLDSLKLQKLEISEKLIDKNDIIPLPV-----RPPNLCAGCMHRTVFYAFKEVSK 385
            I +++     +++ +     +    +  + +     R P  C+GC H T      E S+
Sbjct: 394 AIYDRLPQGPHMERAQAYLNRVSAAGVAAVSLAADQARKPFFCSGCPHNTST-KLPEGSR 452

Query: 386 ELKKHNIQTIFSGDIGC-YTLGNAPPLELIDTCLCMGAGISIAGGISRTTKNSKNV-AFI 443
            L            IGC Y  G   P+  ++T +  G G++  G    T++  K+V   +
Sbjct: 453 AL----------AGIGCHYMAGFNDPMTDLNTHMG-GEGLTWVGAAPFTSE--KHVFQNL 499

Query: 444 GDSTFFHSGIPAVINAVYNNADVTIAVLDNRTTAMTGHQPHPGTGKTALGKPTKLIDIEG 503
           GD T+ HSG  A+  AV    ++T  +L N   AMTG Q    +G T   + T+ +  EG
Sbjct: 500 GDGTYNHSGSLAIRGAVAAGTNITYKLLYNDAVAMTGGQ-RAESGFTP-AQITRQLAAEG 557

Query: 504 ILKSCGV--EFVKTVSADDFSACKEI---------SKEVIEYNGPSAVVFRGNCV----- 547
           + K+  V  E  +    +D +   EI          + + E  G + +++   C      
Sbjct: 558 VKKTVIVVDELERYQGVNDLAPGVEIFPRSDLMRVQEMLRETPGTTVLLYDQTCATEKRR 617

Query: 548 -----SLVKSDKKYVIDKNKCINCKICVERLGCPAI 578
                S+ K+ ++  I+   C  C  C  +  C ++
Sbjct: 618 RRKRGSMPKATQRVFINPLVCEGCGDCSVKSNCVSV 653