Pairwise Alignments

Query, 414 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

Subject, 573 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 78/353 (22%), Positives = 125/353 (35%), Gaps = 73/353 (20%)

Query: 15  LLRHVSEGSEFYKNKFSKAGINIDEISSLEDFKKIPFTEKEELRSAYP-LGLQAVPDEKI 73
           LL+H  E    Y+     AG++ D + S  DF  +P   +    +  P L  +A+P + +
Sbjct: 46  LLKHAYETVPHYRALMDGAGLHPDAVRSFADFAALPVLRRWPAGAPAPDLVSKALPRKAL 105

Query: 74  VRIHSSSGTTG----SPVIIPYTQKDVD-------------TWSEMMMRCYQMAGVTNKD 116
             +   S   G    +P++     +D               T ++M++R Y  +G  + D
Sbjct: 106 AALQGQSAENGGCLPAPILRDRAARDETQANWLLCLTFAGWTQADMVVRLYAASGDESGD 165

Query: 117 RIQITPGYGLWTA------GIGFQLGAERLGAMAIPM-GPGNTEKQLQMMVDLKSTILTS 169
            +   PG   W A      G  +   A      AI   G        ++M D+   +   
Sbjct: 166 LLH--PGVREWLAGTLAVDGCTYAPDAVAQWVKAIRRCGRAYVLGNARVMADMADFMREG 223

Query: 170 TSSYALLLAEEIR---------KKGIHDKIHLKIGVIGSERWSEKM-------------- 206
                 +    +            G+ D   L IGV G    + +               
Sbjct: 224 GIRLGNVRGAVVSGGRGDHHPYANGLPDAGGLHIGVPGQTDQTGQTGQTGHAVHTGPADG 283

Query: 207 ----RNRIESELGIKSFDIYGLTEIYGPGIALDC---EYHEGMHYWSDHLLFEIIDPVTG 259
               R RI    G   FD+YG  E+  P IA+ C     H   H  S H+ FE       
Sbjct: 284 DGTGRQRIAEAFGCPVFDLYGCAEV--PCIAMQCGAGNLHLLTH--SAHVAFE------- 332

Query: 260 ENLPDGELG--ELVITTLTKEGAPLIRYRTRDLTRIIPEKCKCGSEYPRIDRI 310
              PD   G   L++T L     P++R+ T D    +   C CG  +P + R+
Sbjct: 333 ---PDAACGPPRLIVTDLNNRAMPVLRFDTGDHGVPVDGPCPCGRGFPLMRRV 382