Pairwise Alignments

Query, 414 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

Subject, 435 a.a., phenylacetate-coenzyme A ligase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  367 bits (942), Expect = e-106
 Identities = 191/411 (46%), Positives = 271/411 (65%), Gaps = 9/411 (2%)

Query: 12  VKKLLRHVSEGSEFYKNKFSKAGINIDEISSLEDFKKIPFTEKEELRSAYPLGLQAVPDE 71
           ++ L   V      Y+ +F +AGI+  +I  L D K +PFTEK++LR+ YP GL AVP E
Sbjct: 23  LRNLCERVYANVPHYRRRFDEAGISPADIRKLSDLKYLPFTEKQDLRNNYPYGLFAVPKE 82

Query: 72  KIVRIHSSSGTTGSPVIIPYTQKDVDTWSEMMMRCYQMAGVTNKDRIQITPGYGLWTAGI 131
            IVR+H+SSGTTG   ++ YT++D+D W+EMM R +  AGV+ +D I    GYGL+T G+
Sbjct: 83  NIVRLHASSGTTGKATVVGYTKRDLDNWAEMMARAFAAAGVSRRDLIHNAYGYGLFTGGL 142

Query: 132 GFQLGAERLGAMAIPMGPGNTEKQLQMMVDLKSTILTSTSSYALLLAEEIRKKGIH-DKI 190
           G   GAERLGA  IP+  G T++Q+Q++ D  +T++  T SYAL L E   + GI   ++
Sbjct: 143 GAHYGAERLGATVIPVSGGGTKRQVQLLRDFGATVICCTPSYALYLHEASLEAGIDMREL 202

Query: 191 HLKIGVIGSERWSEKMRNRIESELGIKSFDIYGLTEIYGPGIALDC-EYHEGMHYWSDHL 249
            L+ GV G+E WSE+MR  IE +LGI + +IYGL+EI GPG+A++C +   GMH + DH 
Sbjct: 203 PLRAGVFGAEPWSEEMRAEIEQKLGISAVNIYGLSEIMGPGVAIECADAKSGMHIFEDHF 262

Query: 250 LFEIIDPVTGENLPDGELGELVITTLTKEGAPLIRYRTRDLTRIIPEKCKCGSEYPRIDR 309
           L EIIDPVTGE LP GE GELVITTLTKEG PL+RYRTRD+T +    C CG  + R+ R
Sbjct: 263 LPEIIDPVTGEQLPYGETGELVITTLTKEGIPLVRYRTRDITSLDRTPCSCGRTHMRMRR 322

Query: 310 ILGRADDRIKIKGVNIYPGQIEDLIHKLNGVSSEYQIVLSRFEGRDSMLFRVEV------ 363
           I GR+DD + I+GVN++P QIE +I +  G S  YQIV++R    D++  ++EV      
Sbjct: 323 ITGRSDDMLIIRGVNVFPQQIEAIIIEAEGTSPHYQIVVTRDGNLDNIEVQIEVSGDFFS 382

Query: 364 DVLEKDFEETKLAIIKAFKTYIGISPDVECLKVGELPRSEKKSRRVFDNRD 414
           D + K+ +  +  I K  K ++G++  V  ++   + RSE K++RV D R+
Sbjct: 383 DAI-KNLQRREARIQKTIKEFLGVTAKVRLVEPRTIQRSEGKAKRVVDLRE 432