Pairwise Alignments

Query, 414 a.a., phenylacetate--CoA ligase from Methanococcus maripaludis S2

Subject, 449 a.a., AMP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  105 bits (261), Expect = 4e-27
 Identities = 99/324 (30%), Positives = 146/324 (45%), Gaps = 17/324 (5%)

Query: 33  AGINIDEISSLEDFKKIPFTEKEELRSAYPLGLQAVPDEKIVRI--HSSSGTTGSPVIIP 90
           AGI    + S  D  ++PF E + LR A PL L  V  + + R     +SG+TG P  + 
Sbjct: 52  AGIAASSLYSRHDLARLPFMEADILREA-PLKLLCVSQDDVARAVTFDTSGSTGPPKRVF 110

Query: 91  YTQKDVDTWSEMMMRCYQMAGVTNKDRIQITPGYGLWTAGIGFQLG--AERLGAMAIPMG 148
            T +D++                 +  + + P      A +G  LG  A R+G   +   
Sbjct: 111 CTAEDIENTITFFSHGLLSFMQRGEALLALLPAER--PASVGRLLGEAAGRVGVRPLSAS 168

Query: 149 PGNTEKQLQMMVDLKST-ILTSTSSYALLLAEEIRKKGIHDKIHLKIGVIGSERWSEKMR 207
           P +    +  M   +    +  +  +    A    + G      +   ++  +     +R
Sbjct: 169 PEHGWDSIADMAHREGVRAVVGSPLHVREFALAWHRAGFPSGA-ISTVLLCWDAAPRALR 227

Query: 208 NRIESELGIKSFDIYGLTEIYGPGIALDCEYHEGMHYWSDHLLFEIIDPVTGENLPDGEL 267
             +   LG +    +G+TE  G G AL C    GMH   + LL E+ DPV+G  LPDG  
Sbjct: 228 ALLAETLGCEVRHHWGMTET-GMGGALSCG-EAGMHLRENDLLVEVTDPVSGVPLPDGTW 285

Query: 268 GELVITTLTKEGAPLIRYRTRDLTRIIPEKCKCGSEYPRIDRILGR-ADDRIKIKGVNIY 326
           GELV+TTL +   PLIRYRT D  RI+P  C CGS   RID + GR AD+R+   G    
Sbjct: 286 GELVVTTLDRRAMPLIRYRTGDRGRILPGTCPCGSPQRRIDLVPGRLADERLLPDGT--- 342

Query: 327 PGQIEDLIHKLNGVSS--EYQIVL 348
           P ++ DL   L G+    EY+  L
Sbjct: 343 PLRLIDLDECLLGLPDVVEYRACL 366