Pairwise Alignments

Query, 360 a.a., hydrogenase formation protein HypD from Methanococcus maripaludis S2

Subject, 367 a.a., hydrogenase expression/formation protein HypD from Synechococcus elongatus PCC 7942

 Score =  262 bits (670), Expect = 9e-75
 Identities = 140/334 (41%), Positives = 198/334 (59%), Gaps = 9/334 (2%)

Query: 33  IMHVCGSHEHTICKYGIRDVLPDNITVVPGPGCPVCVTTQKEIDKAMYLAEQGYTI-ATL 91
           +M VCG   H+I +YG+  +LP+ +T++ GPGCPVCVT    ID+A+ +A+    I  + 
Sbjct: 30  LMEVCGGQTHSIVRYGLDTLLPEGVTLLHGPGCPVCVTPGSVIDQAIAIAQDPQVIICSF 89

Query: 92  GDMYRVPGSKK-SLMQLQSEGADVKIVYGIGDAVKLAKKQ-DEKVVFVAIGFETTAPTTA 149
           GDM RVPG ++ SL Q ++ GA V+IVY   DAV +A K  D +VVF+A+GFETTAP TA
Sbjct: 90  GDMVRVPGDRQQSLQQARAAGAQVQIVYSPLDAVAIAAKNPDRQVVFLAVGFETTAPATA 149

Query: 150 AELLNKPE----NFYILNSHRQTPPVMGFLLGGGTSLNLDGFICPGHVSTITGLKPYYDP 205
             +    +    NF +L SH +  P M  LL       + GF+  GHV T+ GL  Y   
Sbjct: 150 LAIAQAQQQQLTNFSVLLSHVRVAPAMTQLLAD-PDCRIQGFLAAGHVCTVAGLAEYPAI 208

Query: 206 CKTYHAPMVVAGFEPIDVMASIVMILKQLVNGEAKVENEYTRGVREEGNVIAQKIMNKVF 265
              YH P+ + GFEP+D++  I   L QL +G ++V N Y R V+E GN+ AQ+ + +VF
Sbjct: 209 ANRYHVPIAITGFEPVDILQGIYACLDQLESGRSEVVNCYGRAVQEAGNLAAQQWVERVF 268

Query: 266 EPADVAWRGFPVIKDGGMKLREEFKKYDVHENIDVPD-IKETINKACICSEILRGEKLPH 324
             AD  WR    I +GG++ + EFK +D H    +   I  T    CI   +L+G+K P 
Sbjct: 269 AIADQDWRSLGTIPEGGLEFQPEFKSFDAHCRFAITGAIALTSVNDCISGLVLQGQKQPC 328

Query: 325 DCKLFGKTCDPMNPVGSCMVSDEGTCRIFYKYSK 358
           DC  FG+TC P  P+G+ MVS EG C  +Y+Y +
Sbjct: 329 DCPAFGRTCTPEKPLGAPMVSSEGACAAYYRYRR 362