Pairwise Alignments

Query, 360 a.a., hydrogenase formation protein HypD from Methanococcus maripaludis S2

Subject, 376 a.a., hydrogenase expression/formation protein HypD from Dechlorosoma suillum PS

 Score =  278 bits (710), Expect = 2e-79
 Identities = 152/362 (41%), Positives = 210/362 (58%), Gaps = 13/362 (3%)

Query: 12  ELIKKSIQTIQKLSEKLDEVKIMHVCGSHEHTICKYGIRDVLPDNITVVPGPGCPVCVTT 71
           EL +     I K +        M  CG H H I +YG+ D+LP N+ ++ GPGCPVCV  
Sbjct: 11  ELAQGLAAAIAKEARPERRYHFMEFCGGHTHAISRYGVTDLLPANVRMIHGPGCPVCVLP 70

Query: 72  QKEIDKAMYLA-EQGYTIATLGDMYRVPGSKK-SLMQLQSEGADVKIVYGIGDAVKLAKK 129
              +D+A+ LA +    + T GD  RVP S   S+++ ++ GAD+++VY   DA+KLA++
Sbjct: 71  IGRVDQAIRLALKHNVILCTYGDCLRVPASDGLSMLKAKARGADIRMVYSSADALKLAQE 130

Query: 130 QDEK-VVFVAIGFETTAPTTAAELLNKP----ENFYILNSHRQTPPVMGFLLGGGT---- 180
             EK VVF AIGFETT P TA  +        +NF +L  H  TP  +  +L        
Sbjct: 131 NPEKQVVFFAIGFETTTPPTAVAIKQAKVMGLKNFSVLCCHVLTPSAISNILESPEVRKL 190

Query: 181 -SLNLDGFICPGHVSTITGLKPYYDPCKTYHAPMVVAGFEPIDVMASIVMILKQLVNGEA 239
            ++ LDGFI P HVSTI G +PY    + Y  P+V+AGFEP+DVM +I M+++Q+  G A
Sbjct: 191 GTVPLDGFIGPAHVSTIIGSRPYEFFAEEYRKPVVIAGFEPLDVMQAIRMLVRQVNEGRA 250

Query: 240 KVENEYTRGVREEGNVIAQKIMNKVFE-PADVAWRGFPVIKDGGMKLREEFKKYDVHENI 298
           +VENE++R V  EGN+ AQ ++ +VFE      WRG   +    +++R  F ++D  +  
Sbjct: 251 EVENEFSRAVSREGNLKAQNLVAEVFELRRAFEWRGLHTVPYSALRIRGGFAEFDAEQRF 310

Query: 299 DVPDIKETINKACICSEILRGEKLPHDCKLFGKTCDPMNPVGSCMVSDEGTCRIFYKYSK 358
               +    +KAC C  ILRG K P DCKLFG  C P NPVGSCMVS EG C   Y Y +
Sbjct: 311 GEDYVSVPDHKACECGAILRGAKRPQDCKLFGTVCTPENPVGSCMVSSEGACAAHYTYGR 370

Query: 359 FR 360
           FR
Sbjct: 371 FR 372