Pairwise Alignments

Query, 264 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 154 a.a., CBS from Synechococcus elongatus PCC 7942

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)

Query: 62  VSEFMTPRDDMIVTKPHTKIMDVGRIMFRTGFSKLPIVDENNNILGIITNTDVIRSQIEK 121
           V++FMT   D I  KP T + +  RI+     S LP+VDE   ++G+++ TD++  +   
Sbjct: 5   VADFMTR--DPISVKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLMWRESGV 62

Query: 122 TTPKKLKKIVNSYINL----GYE--------------VTTKRETIQIDDLIPTQANVYED 163
            TP    ++++S+I L     YE              +T +  TI  D  +P  A ++ D
Sbjct: 63  PTPPPYIQVLDSFIYLENPARYEQELHKALGETVAEVMTAQPLTIAADRPLPEAARLFND 122

Query: 164 ELYGRAYEL 172
               R + L
Sbjct: 123 RKVHRLFVL 131



 Score = 25.4 bits (54), Expect = 7e-04
 Identities = 26/148 (17%), Positives = 63/148 (42%), Gaps = 35/148 (23%)

Query: 6   EYMTKKVHSITPDATVSDIIKLVKETTHDTFPVVVNS-KVKGIVSVHDLIGKD------- 57
           ++MT+   S+ P   +++ I+++ +      PVV  + ++ G++S  DL+ ++       
Sbjct: 7   DFMTRDPISVKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLMWRESGVPTPP 66

Query: 58  --------------------EL-----DEVSEFMTPRDDMIVTKPHTKIMDVGRIMFRTG 92
                               EL     + V+E MT +   +       + +  R+     
Sbjct: 67  PYIQVLDSFIYLENPARYEQELHKALGETVAEVMTAQP--LTIAADRPLPEAARLFNDRK 124

Query: 93  FSKLPIVDENNNILGIITNTDVIRSQIE 120
             +L ++  ++ ++G+IT  D+IR+  +
Sbjct: 125 VHRLFVLSGDHQVVGVITRGDIIRAMAQ 152