Pairwise Alignments

Query, 601 a.a., translation initiation factor IF-2 from Methanococcus maripaludis S2

Subject, 1030 a.a., translation initiation factor IF-2 from Synechococcus elongatus PCC 7942

 Score =  185 bits (469), Expect = 9e-51
 Identities = 156/556 (28%), Positives = 263/556 (47%), Gaps = 95/556 (17%)

Query: 7    RCPIVSVLGHVDHGKTSLLDKIRRTRVTQREAGGITQHIGASEIPINTIKKVSKDLLGLF 66
            R P+V+V+GHVDHGKT+LLD IR+TRV   EAGGITQHIGA  + +       +      
Sbjct: 523  RPPVVTVMGHVDHGKTTLLDAIRKTRVAAGEAGGITQHIGAYHVDVEHNGDQHQ------ 576

Query: 67   KADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINILKQCKT 126
                    I+ +DTPGHEAFT++R RG  + DIAILVV  ++G +PQT+EAI+  K  + 
Sbjct: 577  --------IVFLDTPGHEAFTAMRARGARVTDIAILVVAADDGVRPQTLEAISHAKAAEV 628

Query: 127  PFVVAANKVDRIPGWNSSEGPFILNFNEKNQHPNAMTEFEIRLYENVIKHLNELGFDADL 186
            P +VA NK D+                            E    + V + L E G   + 
Sbjct: 629  PLIVAINKCDK----------------------------EEAQPDRVKQELTEYGLVPEE 660

Query: 187  FSRVKDTTKTINVVPVSAMTGEGVPDLLVIISGLAQRFLEQKLALNVEGYAKGTVLELKE 246
            +       +T+ +VPVSA+ GE +  LL +I  + +    ++L  N +  A+GTV+E   
Sbjct: 661  WG-----GETV-MVPVSAIKGENIDQLLEMILLVTE---VEELVANPDRAARGTVIEAHL 711

Query: 247  EKGLGKTIDAIIYDGIAKTGDFLVVGNPDGVLVSKIKALLKPKELDEMRDPKDKFKPS-- 304
            +K  G     ++ +G  + GD LV G+    ++ K++A+     +D+  D  +   PS  
Sbjct: 712  DKARGPVATLLVQNGTLRVGDVLVAGS----VLGKVRAM-----VDDRGDRVEAATPSFA 762

Query: 305  KQISAATGVKISAPDLDSVIAGSPLRIVPKNQVEAAKEEVLEE------VEEFTILTDDE 358
             ++     V  +  + +        R V  ++ +  ++  L++      V   T+    +
Sbjct: 763  VEVLGLGDVPAAGDEFEVYSDEKSARAVATSRADEQRQSRLQQAMASRRVSLGTVSAQAQ 822

Query: 359  -------GIIIKADTMGSLEALANEL-----RKVNAKIKKAEVGDISKKDVIEASSYAST 406
                    +I+KAD  GS+EA+   L     ++V  ++  A  G+I++ DV  A++  + 
Sbjct: 823  EGELKELNLILKADVQGSVEAILGSLEQLPQKQVQVRVLLAAPGEITETDVDLAAASGA- 881

Query: 407  NPLNGLIISFNTKVLADAKAEIEKSDVKLLEGKIIYKLVEEHEEWTKEMEELMKSDEINR 466
                 +I+ FNT + + AK   +++ V + +  IIYKL+E+ +     ME L++ +    
Sbjct: 882  -----VIVGFNTTLASGAKRAADEAGVDVRDYDIIYKLLEDIQ---AAMEGLLEPE---- 929

Query: 467  LTKPAMIKILPNCIFRQKEPAVCGVEVLYGTLKIGSPIMSEDGKKLGYVKEMRD--NQQE 524
            L +  + ++    +F     AV G  V  G       I    G  L Y   +      +E
Sbjct: 930  LVEEPLGQVEVRAVFSIGRGAVAGCYVQSGKAIRNCNIRVRRGSNLVYTGTLDSLKRMKE 989

Query: 525  NIKEAKVGMQVPVSID 540
            ++KE   G +  + +D
Sbjct: 990  DVKEVNSGYECGIGLD 1005