Pairwise Alignments

Query, 601 a.a., translation initiation factor IF-2 from Methanococcus maripaludis S2

Subject, 394 a.a., elongation factor Tu (RefSeq) from Shewanella loihica PV-4

 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 76/278 (27%), Positives = 107/278 (38%), Gaps = 64/278 (23%)

Query: 11  VSVLGHVDHGKTSLLDKIRR--TRVTQREAGGITQHIGASE-----IPINTIKKVSKDLL 63
           V  +GHVDHGKT+L   I    T+    EA    Q   A E     I INT         
Sbjct: 15  VGTIGHVDHGKTTLTAAISHVLTKTYGGEAKDFAQIDNAPEERERGITINTSH------- 67

Query: 64  GLFKADLSIPGILVIDTPGHEAFTSLRKRGGALADIAILVVDINEGFKPQTIEAINILKQ 123
              + D        +D PGH  +      G A  D AILVV   +G  PQT E I + +Q
Sbjct: 68  --IEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQ 125

Query: 124 CKTPFVVA-ANKVDRIPGWNSSEGPFILNFNEKNQHPNAMTEFEIRLYENVIKHLNELGF 182
              PF++   NK D +      E                + E E+R      + L+E  F
Sbjct: 126 VGVPFIIVFMNKCDMVDDEELLE----------------LVEMEVR------ELLSEYDF 163

Query: 183 DADLFSRVKDTTKTINVVPVSAMTG-EGVPDLLVIISGLA----------QRFLEQKLAL 231
             D           + V+  SA+   EG P+    I  LA          +R ++    L
Sbjct: 164 PGD----------DLPVIQGSALKALEGEPEWEAKILELAEALDSYIPEPERAIDGAFIL 213

Query: 232 NVEGY----AKGTVLELKEEKGLGKTIDAIIYDGIAKT 265
            +E       +GTV+  + E+G+ K  D +   GI +T
Sbjct: 214 PIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGIKET 251