Pairwise Alignments
Query, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 393 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ
Score = 133 bits (335), Expect = 7e-36
Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 34/333 (10%)
Query: 32 GLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPE 91
G E YN G Y SI +N L PK+ + W KGN+ LG + + ++KAL I P
Sbjct: 19 GTEYYNNGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYQMLGKSKLAQDSYEKALSIRPN 78
Query: 92 NSEAFNG-------------------------------LGTVLSKTGNYQKALEMYDKSL 120
+ E LG KTG +++A+ Y+ L
Sbjct: 79 DLEIIKSYTMLLNSLELFKESVEILKNVSESDDEIIEILGDAYLKTGKFEEAILHYNDIL 138
Query: 121 NIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKS 180
E KG L ++++ EA++ ++K + I+ +++VW N G + + +YEK+
Sbjct: 139 ERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKA 198
Query: 181 IDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKAD-AY 239
I Y+ L + L KG++ KL A++ + T Y P+ + Y
Sbjct: 199 IQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLY-TKVLEKHIQNYEPWCRVGLLY 257
Query: 240 RDTENFEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQI 299
DTE++E A+ Y + A E NP N IL+ G K++NY+ + + A+ D + +
Sbjct: 258 YDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKA 317
Query: 300 WILKGNSYVGLKDYESSISCYKKALEIEPKNEN 332
W KG L+ + +I CYKKA+ I KN++
Sbjct: 318 WCYKGYILNLLERHYEAIDCYKKAISIN-KNDS 349
Score = 88.6 bits (218), Expect = 2e-22
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 31/263 (11%)
Query: 99 LGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISI-- 156
+GT G YQK++E ++K+LN + +N +AW KG + + A D ++K++SI
Sbjct: 18 IGTEYYNNGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYQMLGKSKLAQDSYEKALSIRP 77
Query: 157 ---------------------------NAKNSD--VWYNKGETQFKLGEYEKSIDSYNKA 187
N SD + G+ K G++E++I YN
Sbjct: 78 NDLEIIKSYTMLLNSLELFKESVEILKNVSESDDEIIEILGDAYLKTGKFEEAILHYNDI 137
Query: 188 LLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEY 247
L + + L KG + + L+ ++ A+E + I+P +A+ + +E
Sbjct: 138 LERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEK 197
Query: 248 ALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSY 307
A+++YD L + + + +SKG L K+ + A+ + ++ +N + W G Y
Sbjct: 198 AIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLY 257
Query: 308 VGLKDYESSISCYKKALEIEPKN 330
+DYE++I + A E P N
Sbjct: 258 YDTEDYETAIYYLELANERNPLN 280
Score = 88.2 bits (217), Expect = 3e-22
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 34/258 (13%)
Query: 39 GNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNG 98
G + ++I YN L P+ EI KG +L+ L + E+ E ++K L I P ++E +
Sbjct: 125 GKFEEAILHYNDILERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKN 184
Query: 99 LGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINA 158
+G Y+KA++ YD LN + +KG L + + +EA+D + K + +
Sbjct: 185 IGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHI 244
Query: 159 KNSDVW----------------------------------YNKGETQFKLGEYEKSIDSY 184
+N + W G T KL Y K ++
Sbjct: 245 QNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFM 304
Query: 185 NKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTEN 244
KAL D + A KG L+ + AI+C+ A +IN + ++ Y+
Sbjct: 305 EKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGK 364
Query: 245 FEYALKYYDEALEINPSN 262
+Y+ + Y+ A+ + N
Sbjct: 365 EDYSKEAYENAVNLENHN 382
Score = 80.9 bits (198), Expect = 5e-20
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 34/206 (16%)
Query: 20 IGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGEST 79
I ++ + + G Y Y +I Y++ L E+ + ++KG++L KLG E+
Sbjct: 174 ISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEAL 233
Query: 80 ECFDKALLIDPENSEAFNGLG---------------------------TVLSKTG----- 107
+ + K L +N E + +G ++L K G
Sbjct: 234 DLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVK 293
Query: 108 --NYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWY 165
NY K LE +K+L+ DSE ++AW KG LN ++R+ EAIDC+ K+ISIN +S W
Sbjct: 294 LRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWM 353
Query: 166 NKGETQFKLGEYEKSIDSYNKALLID 191
+ +G+ + S ++Y A+ ++
Sbjct: 354 HLSNVYKTIGKEDYSKEAYENAVNLE 379
Score = 65.1 bits (157), Expect = 3e-15
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 168 GETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPK 227
G + G+Y+KSI+ +NK L + K A KGN+Y L + A + + A +I P
Sbjct: 19 GTEYYNNGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYQMLGKSKLAQDSYEKALSIRPN 78
Query: 228 SEYPPYYKADAYRDTENFEYALKYYDEALEI----NPSNSDILISKGICLDKMKNYSAAI 283
+ + +L+ + E++EI + S+ +I+ G K + AI
Sbjct: 79 D-------LEIIKSYTMLLNSLELFKESVEILKNVSESDDEIIEILGDAYLKTGKFEEAI 131
Query: 284 SNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALEIEPKNENAKENI 337
+++ ++ P+ +I KG + VGLK ++ ++ Y+K L+I P + +NI
Sbjct: 132 LHYNDILERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKNI 185