Pairwise Alignments

Query, 892 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2

Subject, 359 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 36/279 (12%)

Query: 384 TYYELNSENIDN--IPLAPDSVPPVVSIVSPRENAFFGENETILVDVSVTDN--SEIHSV 439
           T +  +SE + N  +    D++ P V    P     F  + T  +++++ DN  S I+  
Sbjct: 96  TLFVNDSEGLTNQTVTFTVDTIAPFVDAFVPD----FTNDTTPTIELNLIDNVSSNINYT 151

Query: 440 MLEVDNSYKEIMVQNGTTYSKSLDNLDYGAHTIKIYAEDAVG---NVNFFESRVFSISTP 496
           +    ++     V N T  + +L+ L  G H++ I A DA G   N++ F      + T 
Sbjct: 152 IYVDGSADVNGSVINNTPTNVTLNELVEGDHSVTIEATDAHGWATNLSGF------MMTV 205

Query: 497 DSTPPEVRIISPVSKSYAEGSEVSIKVQITDE-SDIYSAYAKID-----DYTVDLIESNG 550
           D+T P V I +P+  +    S   +   I D   D  + +  +D     D T D   +  
Sbjct: 206 DTTAPAVTISTPIDGANITASNPQLNFTIADNLCDTINYFIDVDGTPVNDSTADNATAIL 265

Query: 551 YYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVEIIEPEIGDSFEE 610
           Y +N+ D    G HT+ ++  D A N N N+ +T  V   D   P V I  PE+  ++  
Sbjct: 266 YTLNLTD----GTHTITVVAIDDAFN-NANDSITVVV---DTIAPTVTINNPELDYNYST 317

Query: 611 NVSIKVSATDDSGIDSVKVMLDE---KVSFTLTKNSEYY 646
           N+ + V+ TDD+ +D+V   +D      + TLT+   Y+
Sbjct: 318 NI-LNVTVTDDN-LDTVIAEIDNGSVLENITLTETDGYF 354