Pairwise Alignments
Query, 892 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2
Subject, 484 a.a., Ig-like domain-containing protein from Methanococcus maripaludis JJ
Score = 78.6 bits (192), Expect = 9e-19
Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 28/332 (8%)
Query: 378 GDTLSETYYELNSENIDNIPLAPDSVPPVVSIVSPRENAF------FGENETILVDVSVT 431
G TL+E + ID++ +S V+ + + F +G N +IL +V+V
Sbjct: 126 GLTLAEGENNITVTAIDDVENIGESTTTVIVDTTAPQIVFNNVLPVYGYNSSIL-NVTVI 184
Query: 432 DNSEI--HSVMLEVDNSYKEIMVQNGTTY-SKSLDNLDYGAHTIKIYAEDAVGNVNFFES 488
DN+ + +V+L + I + N + Y + G + + I A DA GNVN +
Sbjct: 185 DNTSVIVTAVILPIMPPIDTINLTNDSGYFENNTYEFSEGPNMVTITATDAAGNVNTNNT 244
Query: 489 RVFSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQITDE-SDIYSAYAKIDDYTVDLIE 547
+F D T PE I + + + +++I V D + + + + ID T +LI+
Sbjct: 245 MIFV----DITNPEFEI---GTANVSASKDLTISVYANDTWTGVIANISVIDAVTGELID 297
Query: 548 SN-----GYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVEIIEP 602
S G Y L L G + + TD AGN N E +T V D T P V +I
Sbjct: 298 SKINSSFGSYNVTLTVLNDGIYNVTANATDMAGNENVTEPITVTV---DTTNPTV-VINN 353
Query: 603 EIGDSFEENVSIKVSATDDSGIDSVKVMLDEKVSFTLTKNSEYYTGTLTDLSYGIHTLRV 662
G + + V+ +D + + +V +D++++ TL S ++ + + G H + +
Sbjct: 354 GFGPYNYNSSILNVTVSDFTPV-TVIANIDDEINVTLENVSGFFGNSSFEFVEGFHNVTI 412
Query: 663 YAEDNEENINSDEVIQFEIEVPDYSYTKPTTD 694
D N+NS E + F +++ D T T +
Sbjct: 413 VTTDLAGNVNSSENVTFRVDLTDPVITVNTVE 444
Score = 58.5 bits (140), Expect = 9e-13
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 424 ILVDVSVTDNSEIHSVMLEVDNSYKEIMVQNGTTYSKSLDNLDYGAHTIKIYAEDAVGNV 483
++ ++SV D + ++++S+ +Y+ +L L+ G + + A D GN
Sbjct: 281 VIANISVIDAVTGELIDSKINSSFG--------SYNVTLTVLNDGIYNVTANATDMAGNE 332
Query: 484 NFFESRVFSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQITDESDIYSAYAKIDD-YT 542
N E ++ D+T P V +I+ Y S + + V ++D + + + A IDD
Sbjct: 333 NVTEPITVTV---DTTNPTV-VINNGFGPYNYNSSI-LNVTVSDFTPV-TVIANIDDEIN 386
Query: 543 VDLIESNGYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVEIIEP 602
V L +G++ N G H + I+ TD AGN N +E VTF V D+T P + +
Sbjct: 387 VTLENVSGFFGNSSFEFVEGFHNVTIVTTDLAGNVNSSENVTFRV---DLTDPVITVNTV 443
Query: 603 EIGDSFEENVSIKVSATDDSGIDSV 627
E G+ F + D+ IDSV
Sbjct: 444 E-GEYFNNGSDVLNFTVDEDYIDSV 467
Score = 53.9 bits (128), Expect = 2e-11
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 468 GAHTIKIYAEDAVGNVNFFESRVFSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQITD 527
G + +KIYA D+ G+VN E+ F + D T PEV I +PV+ S + + I D
Sbjct: 39 GEYEVKIYANDSFGHVNSSETVYFMV---DWTAPEVSIETPVNDSIINIANPQLNFTIID 95
Query: 528 ESDIYSAYAKIDDYTVDLIESNGYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDV 587
+ I + TV+ I N +N + L +G +T A G +N DV
Sbjct: 96 N----VCESVICNITVNGITVNSSEVNTSETLLFG-------LTLAEGENNITVTAIDDV 144
Query: 588 -NEGDITPPEV------EIIEPEIGDSFEENVSI-KVSATDDSGIDSVKVMLDEKV---S 636
N G+ T + +I+ + + N SI V+ D++ + V+L +
Sbjct: 145 ENIGESTTTVIVDTTAPQIVFNNVLPVYGYNSSILNVTVIDNTSVIVTAVILPIMPPIDT 204
Query: 637 FTLTKNSEYYTGTLTDLSYGIHTLRVYAEDNEENINSDEVI--------QFEIEVPDYSY 688
LT +S Y+ + S G + + + A D N+N++ + +FEI + S
Sbjct: 205 INLTNDSGYFENNTYEFSEGPNMVTITATDAAGNVNTNNTMIFVDITNPEFEIGTANVSA 264
Query: 689 TKPTT 693
+K T
Sbjct: 265 SKDLT 269
Score = 36.6 bits (83), Expect = 4e-06
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 636 SFTLTKNSEYYTGTLTDLSYGIHTLRVYAEDNEENINSDEVIQFEIE--VPDYSYTKPTT 693
+ TLT+ Y+ + + G + +++YA D+ ++NS E + F ++ P+ S P
Sbjct: 19 NITLTETDGYFGNSTYVFAQGEYEVKIYANDSFGHVNSSETVYFMVDWTAPEVSIETPVN 78
Query: 694 DNTQEPAETSNPENKTTDTPLNNETGEITPNESENESNGEIENNTNESQNSET 746
D+ +NP+ T ++N + N + N I N++E SET
Sbjct: 79 DSI---INIANPQ--LNFTIIDNVCESVICNITVN----GITVNSSEVNTSET 122