Pairwise Alignments

Query, 892 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2

Subject, 599 a.a., Ig-like domain-containing protein from Methanococcus maripaludis JJ

 Score =  114 bits (285), Expect = 2e-29
 Identities = 128/515 (24%), Positives = 225/515 (43%), Gaps = 66/515 (12%)

Query: 285 LWNSDLNV--LFKNKLLNNVKSGISIEFGTKY-------NTIYDNLFNNSLNVRFEDSGK 335
           ++N  LN   ++   L  NV S  ++ F           NT+    FNN  +V      +
Sbjct: 53  IFNEGLNTVKIYATDLAGNVNSSENVTFRVDLTDPVITVNTVEGEYFNNGSDVLNFTVDE 112

Query: 336 NYWNA-PVINESNILEGEFTAGNVWYTPECTG--FSQKAMNQDTNGDTLSETYYELNSEN 392
           +Y ++    N S  +  + + GN   + E     ++    + DT  + +++T        
Sbjct: 113 DYIDSVTAFNGSTEISLDNSTGNYLNSAELADGVYNVTMYSNDTASNKVNKT-------- 164

Query: 393 IDNIPLAPDSVPPVVSIVSPRENAFFGENETILVDVSVTDNSEIHSVMLEVDNSYKEIMV 452
              +    D+V P V++ +  ++  +  N +IL +V+ TD + + SV+ E+ N  + I +
Sbjct: 165 ---VSFTVDTVNPEVTVNTVEKS--YNYNSSIL-NVTATDIN-LQSVVAEI-NGLENITL 216

Query: 453 QNGTTYSKSLDNLDYGAHTIKIYAEDAVGNVNFFESRVFSISTPDSTPPEVRIISPVSKS 512
              T Y  + +  + G +T+KIYA D  GNVN  E+  F +   D T P + + +   + 
Sbjct: 217 NGSTGYFLTSEIFNEGLNTVKIYATDLAGNVNSSENVTFRV---DLTDPVITVNTVEGEY 273

Query: 513 YAEGSEVSIKVQITDESDIYSAYAKIDDYT-VDLIESNGYYINILDNLEWGAHTLWIIVT 571
           +  GS+V   +  T + D   +    +  T + L  S G Y+N  + L  G + + +   
Sbjct: 274 FNNGSDV---LNFTVDEDYIDSVTAFNGSTEISLDNSTGNYLNSAE-LADGVYNVTMYSN 329

Query: 572 DAAGNSNYNEKVTFDVNEGDITPPEVEIIEPEIGDSF-EENVSIKVSATDD-SGIDSVKV 629
           D A N   N+ V+F V   D   PEV + +P  G ++   + +I V+A D  S + SV  
Sbjct: 330 DTASNK-VNKTVSFTV---DTVNPEVTVNKPVNGTTYTSSSAAINVTANDSLSNVSSVIA 385

Query: 630 MLDEKVSFTLTKNSEYYTGTLTDLSYGIHTLRVYAEDNEENINSDEVIQFEIEVPDYSYT 689
            +    + TL+ + EYYTG    LS G + + + A D   N+NS E +   I VP     
Sbjct: 386 KIGSVRNVTLSFDGEYYTGNTGTLSNGNYEITIIATDLAGNVNSSENVSISIAVP----- 440

Query: 690 KPTTDNTQEPAETSNPENKTTDTPLNNETGE---ITPNESENESNGEIENNTNESQNSET 746
           + ++      + +S+  +  T   + N       +  +E + E  GE+  N   S+N E 
Sbjct: 441 RSSSGGGGGSSYSSDLSDGFTSFVIKNAVSNSNIVYGSEIDGEYAGELRENLYNSENYEL 500

Query: 747 QNNT--DAGDEGN--------------ISDNPSEN 765
             +T    G E N               +DNP EN
Sbjct: 501 SRDTIIVGGPESNGFANRYDSEFGVAITNDNPGEN 535



 Score = 89.0 bits (219), Expect = 8e-22
 Identities = 87/317 (27%), Positives = 147/317 (46%), Gaps = 32/317 (10%)

Query: 418 FGENETILVDVSVTDNSEIHSVMLEVDNSYKEIMVQNGTTYSKSLDNLDYGAHTIKIYAE 477
           +  N +IL +V+ TD + + SV+ E+ N  + I +   T Y  + +  + G +T+KIYA 
Sbjct: 10  YNYNSSIL-NVTATDIN-LQSVVAEI-NGLENITLNGSTGYFLTSEIFNEGLNTVKIYAT 66

Query: 478 DAVGNVNFFESRVFSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQIT-DESDIYSAYA 536
           D  GNVN  E+  F +   D T P + + +   + +  GS+V   +  T DE  I S  A
Sbjct: 67  DLAGNVNSSENVTFRV---DLTDPVITVNTVEGEYFNNGSDV---LNFTVDEDYIDSVTA 120

Query: 537 KIDDYTVDLIESNGYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPE 596
                 + L  S G Y+N  + L  G + + +   D A N   N+ V+F V   D   PE
Sbjct: 121 FNGSTEISLDNSTGNYLNSAE-LADGVYNVTMYSNDTASN-KVNKTVSFTV---DTVNPE 175

Query: 597 VEIIEPEIGDSFEENVSIKVSATDDSGIDSVKVMLDEKVSFTLTKNSEYYTGTLTDLSYG 656
           V +   E   S+  N SI      D  + SV   ++   + TL  ++ Y+  T    + G
Sbjct: 176 VTVNTVE--KSYNYNSSILNVTATDINLQSVVAEINGLENITLNGSTGYFL-TSEIFNEG 232

Query: 657 IHTLRVYAEDNEENINSDEVIQFEIEVPDYSYTKPTTDN--------------TQEPAET 702
           ++T+++YA D   N+NS E + F +++ D   T  T +                ++  ++
Sbjct: 233 LNTVKIYATDLAGNVNSSENVTFRVDLTDPVITVNTVEGEYFNNGSDVLNFTVDEDYIDS 292

Query: 703 SNPENKTTDTPLNNETG 719
               N +T+  L+N TG
Sbjct: 293 VTAFNGSTEISLDNSTG 309