Pairwise Alignments
Query, 892 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis S2
Subject, 1023 a.a., SBBP repeat-containing protein from Methanococcus maripaludis JJ
Score = 95.5 bits (236), Expect = 1e-23
Identities = 171/738 (23%), Positives = 295/738 (39%), Gaps = 106/738 (14%)
Query: 75 NKSNIIIDLKGNKL--SGNYEGRGISISGNNVSLKNGVVSNFDYGIVLENAENCKISNNE 132
N +I +D GN G+ + + + N L N S D+G+ E + + N+
Sbjct: 35 NGQDIALDGDGNSYVTGGSEDVITLKYAPNGTLLWN---STMDFGMTSEMGNSIALDNSG 91
Query: 133 ---VFGNTYDGIYILN-SKNNDISENLVYENGVIGIVTSG--IFLDGSEFNNITKNTVNN 186
V G D + IL + N + N Y+ +G + G I LD S +T
Sbjct: 92 NAYVAGRGNDNVVILKYAPNGTLLWNNSYD--YLGSIDYGKDIALDNSGNAYVTGAGKGR 149
Query: 187 NIY---------NGIELLNSKNNLISGNNVFENEDNG--VFVWNSKNNSIIFNELYQNEN 235
+ NG L NS L N + DNG +V + SI+ + N
Sbjct: 150 YHFYCIVLKYAPNGTLLWNSSLTLDDTNGLKIALDNGGNAYVTGDGDRSILTAKYAPNGT 209
Query: 236 NGILTR----ESKFNTIESNNIFENDDS----GIYSWKSFENTISKNKISKNSEGIILWN 287
T+ S +T+ + +N + GI + +E+ + + G +LWN
Sbjct: 210 LLWYTKYVCGSSTMSTVGEDIALDNSGNAYIAGIGNTGVYEDYLYIT-LKYAPNGTLLWN 268
Query: 288 SDLNVLFKNKLLNNVKSGISIE-FGTKYNT--IYDNLFNNSLNVRFEDSGKNYWNAPVI- 343
+N+ ++ GI ++ G Y T + + + + + +++ +G WN V
Sbjct: 269 RTVNLGLTDQAF-----GIEVDALGNAYVTGCVDNGVTQDIMTIKYAPNGTQEWNRSVDY 323
Query: 344 -NESNILEGEF-TAGNVWYTPECTGFSQK---AMNQDTNGDTL--SETYYELNSENI--- 393
N L+ +GN + T S + + +G L S Y S I
Sbjct: 324 NGRDNALDVALDNSGNAYVAGYITDSSDQQVFVIKYAPDGSELWNSTCLYRSTSYGIAIA 383
Query: 394 -DN---------------------IPLAPDSVPPVVSIVSPRENAFFGENETILVDVSVT 431
DN IP+ D P V+I + E ++ N T +V +
Sbjct: 384 LDNDGNAYVTGSVSGATIVTVKFGIPV--DETAPEVTI-NTLEKSY---NTTSIVTNATA 437
Query: 432 DNSEIHSVMLEVDNSYKEIMVQNGTTYS-KSLDNLDYGAHTIKIYAEDAVGNVNFFESRV 490
+ + SV+ E+ N + I ++N + Y S G +T+KIYA D GN+N E+
Sbjct: 438 TDLNLDSVIAEI-NGTENITLENISGYFVNSTFEFSEGLNTLKIYANDTSGNINSSENIT 496
Query: 491 FSISTPDSTPPEVRIISPVSKSYAEGSEVSIKVQITDESDI-YSAYAKIDDY----TVDL 545
F + D+T PE+RI + + + SE++I V +TD + Y+ + +D+Y +
Sbjct: 497 FIV---DTTNPELRI---ETSNVSNTSELTINVTVTDNIGLNYTNISIVDNYGNLVNSTI 550
Query: 546 IESNGYYINILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVEIIEPEIG 605
E+NG Y L G + + D N N E + +V+E ++
Sbjct: 551 NETNGTYQITLRVPADGIYNITATAFDMVENKNTTEAIAVNVDEN------APLVTINTL 604
Query: 606 DSFEENVSIKVSAT-DDSGIDSVKVMLDEKVSFTLTKNSEYYTGTLTDLSYGIHTLRVYA 664
+ SI ++AT D +DSV ++ + TL S Y+ + + S G++TL++YA
Sbjct: 605 EKSYNTTSIVINATATDLNLDSVIAEINGTENITLENISGYFVNSTFEFSEGLNTLKIYA 664
Query: 665 EDNEENINSDEVIQFEIEVPDYSYT------KPTTDNTQEPAETSNPENKTTDTPLNNET 718
D+ ++NS E I F +++ T K + + T N N T N T
Sbjct: 665 NDSFGHMNSSENISFIVDLNSPEITIKLIEGKYLNNGSNVINFTVNESNLDKVTAFNGST 724
Query: 719 GEITPNESENESNGEIEN 736
+ N + N N + N
Sbjct: 725 EILLNNRTGNYLNSVVLN 742
Score = 90.1 bits (222), Expect = 6e-22
Identities = 173/734 (23%), Positives = 297/734 (40%), Gaps = 126/734 (17%)
Query: 51 VEYVPENGVVEVTTDLKV--SNGIEV---NKSNIIIDLKGNK--LSGNYEGRGISISGNN 103
++Y P NG + + L + +NG+++ N N + G++ L+ Y G +
Sbjct: 157 LKYAP-NGTLLWNSSLTLDDTNGLKIALDNGGNAYVTGDGDRSILTAKYAPNGTLLWYTK 215
Query: 104 VSLKNGVVSNFDYGIVLENAENCKISNNEVFGNTYDGIYIL--NSKNNDI----SENLVY 157
+ +S I L+N+ N I+ G D +YI + N + + NL
Sbjct: 216 YVCGSSTMSTVGEDIALDNSGNAYIAGIGNTGVYEDYLYITLKYAPNGTLLWNRTVNLGL 275
Query: 158 ENGVIGIVTSGI---FLDGSEFNNITKNTV------------NNNI-YNG------IELL 195
+ GI + ++ G N +T++ + N ++ YNG + L
Sbjct: 276 TDQAFGIEVDALGNAYVTGCVDNGVTQDIMTIKYAPNGTQEWNRSVDYNGRDNALDVALD 335
Query: 196 NSKNNLISGNNVFENEDNGVFV----------WNS----KNNSIIFNELYQNENNGILTR 241
NS N ++G + ++ D VFV WNS ++ S N+ N +T
Sbjct: 336 NSGNAYVAGY-ITDSSDQQVFVIKYAPDGSELWNSTCLYRSTSYGIAIALDNDGNAYVTG 394
Query: 242 ---------------------ESKFNTIESN--------NIFEND---DSGIYSWKSFEN 269
E NT+E + N D DS I EN
Sbjct: 395 SVSGATIVTVKFGIPVDETAPEVTINTLEKSYNTTSIVTNATATDLNLDSVIAEINGTEN 454
Query: 270 TISKNKISKNSEGIILWNSDLNVL--FKNKLLNNVKSGISIEF-----GTKYNTIYDNLF 322
+N ++ LN L + N N+ S +I F + N+
Sbjct: 455 ITLENISGYFVNSTFEFSEGLNTLKIYANDTSGNINSSENITFIVDTTNPELRIETSNVS 514
Query: 323 NNS---LNVRFEDS-GKNYWNAPVI-NESNILEGEFTAGNVWYTPECTGFSQKAMNQDTN 377
N S +NV D+ G NY N ++ N N++ E G Q + +
Sbjct: 515 NTSELTINVTVTDNIGLNYTNISIVDNYGNLVNSTIN--------ETNGTYQITLRVPAD 566
Query: 378 GD-TLSETYYEL--NSENIDNIPLAPDSVPPVVSIVSPRENAFFGENETILVDVSVTDNS 434
G ++ T +++ N + I + D P+V+I + E ++ +I+++ + TD +
Sbjct: 567 GIYNITATAFDMVENKNTTEAIAVNVDENAPLVTI-NTLEKSY--NTTSIVINATATDLN 623
Query: 435 EIHSVMLEVDNSYKEIMVQNGTTYS-KSLDNLDYGAHTIKIYAEDAVGNVNFFESRVFSI 493
+ SV+ E+ N + I ++N + Y S G +T+KIYA D+ G++N E+ F +
Sbjct: 624 -LDSVIAEI-NGTENITLENISGYFVNSTFEFSEGLNTLKIYANDSFGHMNSSENISFIV 681
Query: 494 STPDSTPPEVRIISPVSKSYAEGSEVSIKVQIT-DESDIYSAYAKIDDYTVDLIESNGYY 552
D PE+ I K GS V + T +ES++ A + L G Y
Sbjct: 682 ---DLNSPEITIKLIEGKYLNNGSNV---INFTVNESNLDKVTAFNGSTEILLNNRTGNY 735
Query: 553 INILDNLEWGAHTLWIIVTDAAGNSNYNEKVTFDVNEGDITPPEVEIIEPEIGDSFE-EN 611
+N + L G + + I + D AGN + + F + D T P V I P G +F +
Sbjct: 736 LNSVV-LNEGIYNVTIRINDTAGNIA-EKSLNFII---DTTAPVVAINTPINGTTFTTSS 790
Query: 612 VSIKVSATDDS-GIDSVKVMLDEKVSFTLTKNSEYYTGTLTDLSYGIHTLRVYAEDNEEN 670
SI +SA D + SV + + TL+ + +YYTG+ LS G + + + A D N
Sbjct: 791 FSINISANDSLLNVSSVIAKIGSVRNVTLSFDGDYYTGSTGTLSNGNYEITILATDLVGN 850
Query: 671 INSDEVIQFEIEVP 684
+NS+E + + VP
Sbjct: 851 VNSNETVNITVAVP 864
Score = 61.6 bits (148), Expect = 2e-13
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 591 DITPPEVEIIEPEIGDSFEENVSIKVSATDDSGIDSVKVMLDEKVSFTLTKNSEYYTGTL 650
D T PEV I E S+ + + D +DSV ++ + TL S Y+ +
Sbjct: 411 DETAPEVTINTLE--KSYNTTSIVTNATATDLNLDSVIAEINGTENITLENISGYFVNST 468
Query: 651 TDLSYGIHTLRVYAEDNEENINSDEVIQFEIEVPDYSYTKPTTDNTQEPAETSNPENK-- 708
+ S G++TL++YA D NINS E I F ++ T N + ETSN N
Sbjct: 469 FEFSEGLNTLKIYANDTSGNINSSENITFIVD----------TTNPELRIETSNVSNTSE 518
Query: 709 -TTDTPLNNETGEITPNESENESNGEIENNTNESQNSETQNNTDAGDEGNISDNPSENDS 767
T + + + G N S ++ G + N+T N Q +G + + D
Sbjct: 519 LTINVTVTDNIGLNYTNISIVDNYGNLVNSTINETNGTYQITLRVPADGIYNITATAFDM 578
Query: 768 PLEHEDTSDTEPDNNDEGA--------EDSGDTTSETGDATGEE 803
+E+++T++ N DE A E S +TTS +AT +
Sbjct: 579 -VENKNTTEAIAVNVDENAPLVTINTLEKSYNTTSIVINATATD 621