Pairwise Alignments

Query, 334 a.a., hydrogenase expression/formation protein HypE from Methanococcus maripaludis S2

Subject, 341 a.a., Hydrogenase expression/formation protein HypE (NCBI) from Rhodospirillum rubrum S1H

 Score =  245 bits (625), Expect = 1e-69
 Identities = 131/337 (38%), Positives = 203/337 (60%), Gaps = 11/337 (3%)

Query: 3   ITRMHGAGGTVMQKLIKETILGNLENTKIEGGIGLESLDDASTIPIGDKEIVFTVDGHTV 62
           I   HGAGG  MQ LI+       ++        L   DDA+ +P  D  +V + DG  V
Sbjct: 11  IDMTHGAGGRAMQGLIERLFHAAFDDPV------LVRADDAAVLPAADGPLVMSTDGFVV 64

Query: 63  HPIFFPGGDIGRISVCGTVNDLSVMGAKPVALSLSIVLPEGFDIEKLDKIMKSINEACKE 122
            P+FFPGGDIG ++V GTVNDLS+MGA+P+ LS + ++ EGF +  L++I+ S+  A + 
Sbjct: 65  SPLFFPGGDIGSLAVHGTVNDLSMMGARPLYLSSAFIIEEGFALADLERIVASMAAAARA 124

Query: 123 AGVAIITGDTKV---SNVDDIIISSAGIGIVDSGKAVRDCGMKEGDVIIVSGNIGEHGLT 179
           AGV I+TGDTKV      D + I++AGIG+   G        + GD I+V+G +G+HG+ 
Sbjct: 125 AGVRIVTGDTKVVDRGKADGLFITTAGIGVGRVGVHPAADRARAGDRILVNGPLGDHGVA 184

Query: 180 ILLSREGFEFESELKSDVAPVNGLVQSVLNAGFEINAMKDPTRGGLADSLNEMAEKSDLG 239
           +L +R        + SD A +NGLV++++    +++ ++D TRGG+A  LNE+ ++S +G
Sbjct: 185 VLSARGQIGLNVPVHSDSAALNGLVEAMIAVDADLHCLRDATRGGVAAVLNELCDRSRVG 244

Query: 240 ILIHEDKIPISDEVQAIGEALGIDPLTVANEGKVVMSVKEKDSEKILEILTAHPLGKNAK 299
           + I E  +P+   VQ   EALG+DPL +ANEGK+V  V    ++ +L  + AHPLG++A 
Sbjct: 245 MTIEESALPVRPAVQGACEALGLDPLDLANEGKLVAVVDAASAQAVLAAMRAHPLGRDAA 304

Query: 300 IIGNVTS--EHKGVLMETIVGKRIVDTPMGDPIPRVC 334
           +IG V    +H   +     G+R++    G+ +PR+C
Sbjct: 305 LIGTVVDDPDHLVEMTTRFGGRRLIQWRAGEALPRIC 341