Pairwise Alignments

Query, 334 a.a., hydrogenase expression/formation protein HypE from Methanococcus maripaludis S2

Subject, 336 a.a., hydrogenase expression/formation protein HypE (RefSeq) from Shewanella loihica PV-4

 Score =  228 bits (582), Expect = 1e-64
 Identities = 133/333 (39%), Positives = 202/333 (60%), Gaps = 13/333 (3%)

Query: 7   HGAGGTVMQKLIKETILGNLENTKIEGGIGLESLDDASTIPIGDKEIVFTVDGHTVHPIF 66
           HG GG  M +LIK        N        L S +DA+ +   + +  FT D  TV P+F
Sbjct: 12  HGGGGKEMNRLIKSIFFKAFNNPI------LASEEDAALLHF-EGQAAFTTDSFTVSPLF 64

Query: 67  FPGGDIGRISVCGTVNDLSVMGAKPVALSLSIVLPEGFDIEKLDKIMKSINEACKEAGVA 126
           F GG+IG++++ GTVNDL++MGA+P  LS S ++ EGF I+ L  I+ S+ E   ++G  
Sbjct: 65  FAGGNIGKLAIAGTVNDLAMMGAEPQYLSCSFIIEEGFAIKDLKAIVGSMAEELHKSGTR 124

Query: 127 IITGDTKV---SNVDDIIISSAGIGIVDSGKAVRDCGMKEGDVIIVSGNIGEHGLTILLS 183
           I+ GDTKV      D + I+++G+G V   + +    ++ GD I+VSG+IG HG  IL++
Sbjct: 125 IVCGDTKVVPKGCADGLFINTSGVGRVLKPQ-ISVKNLRPGDAILVSGDIGRHGAAILMA 183

Query: 184 REGFEFESELKSDVAPVNGLVQSVLNAGFEINAMKDPTRGGLADSLNEMAEKSDLGILIH 243
           REG   ESEL SD A +  +V+ ++    E++AM+D TRGGLA  LNE A  S++GI + 
Sbjct: 184 REGLTLESELVSDCANLWPVVEQLIACNIEVHAMRDATRGGLAAVLNEWAGASNVGINVE 243

Query: 244 EDKIPISDEVQAIGEALGIDPLTVANEGKVVMSVKEKDSEKILEILTAHPLGKNAKIIGN 303
           E KIP+ DEV+ + E  G +P  +ANEG  +++V  + ++  LEI+  +   + A IIG+
Sbjct: 244 ESKIPVCDEVKGLCELYGFEPHDLANEGTFILAVPGEIADGALEIIQRYGHCQQAAIIGH 303

Query: 304 VTSEHKG-VLMETIVG-KRIVDTPMGDPIPRVC 334
           V   H G V+++T  G  R +D P G+ +PR+C
Sbjct: 304 VEETHPGKVVLKTPWGSSRYLDLPQGELLPRIC 336