Pairwise Alignments

Query, 334 a.a., hydrogenase expression/formation protein HypE from Methanococcus maripaludis S2

Subject, 339 a.a., hydrogenase expression/formation protein HypE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  226 bits (576), Expect = 6e-64
 Identities = 129/333 (38%), Positives = 199/333 (59%), Gaps = 13/333 (3%)

Query: 7   HGAGGTVMQKLIKETILGNLENTKIEGGIGLESLDDASTIPIGDKEIVFTVDGHTVHPIF 66
           HG GG  M KLI+E      +N        L S +DA+ + +      FT D  TV P+F
Sbjct: 15  HGGGGKEMNKLIRELFFTEFDNPI------LRSEEDAAKLEL-QGATAFTTDSFTVSPLF 67

Query: 67  FPGGDIGRISVCGTVNDLSVMGAKPVALSLSIVLPEGFDIEKLDKIMKSINEACKEAGVA 126
           F GGDIG+++V GTVNDL++MGA+P  LS S+++ EGF ++ L  I++S+ +  K++G  
Sbjct: 68  FAGGDIGKLAVAGTVNDLAMMGAEPQYLSCSVIIEEGFSLKDLTTIVRSMAKELKQSGAR 127

Query: 127 IITGDTKV---SNVDDIIISSAGIGIVDSGKAVRDCGMKEGDVIIVSGNIGEHGLTILLS 183
           I+ GDTKV      D + I+++G+G +     +    +  GD IIVS ++G HG  IL++
Sbjct: 128 IVCGDTKVVPKGCADGLFINTSGVGRILRPN-ISAANVAPGDAIIVSRDVGCHGAAILMA 186

Query: 184 REGFEFESELKSDVAPVNGLVQSVLNAGFEINAMKDPTRGGLADSLNEMAEKSDLGILIH 243
           REG   ESEL+SD A +  +V+ ++ A   ++AM+D TRGGL+  LNE A  +++GI ++
Sbjct: 187 REGLSLESELQSDCATLWPVVEQLIAANIPLHAMRDATRGGLSAVLNEWAVAANVGITVN 246

Query: 244 EDKIPISDEVQAIGEALGIDPLTVANEGKVVMSVKEKDSEKILEILTAHPLGKNAKIIGN 303
           E  IP+ DEV+ + E  G +P+ +ANEG  +++V    +   LEI+      ++A IIG 
Sbjct: 247 EASIPVCDEVKGLCELYGFEPMDLANEGTFILAVPNDIALGALEIMQRFGHCESAAIIGT 306

Query: 304 VTSEHKG--VLMETIVGKRIVDTPMGDPIPRVC 334
           V  E  G  +L      KR +D P G+ +PR+C
Sbjct: 307 VNDELPGKVILRTPWNTKRYLDLPQGELLPRIC 339