Pairwise Alignments

Query, 263 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 241 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score = 67.0 bits (162), Expect = 3e-16
 Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 12/215 (5%)

Query: 6   IKIMGGFNKFGESEKVKEL--VVKRGEIFGVVGPTGSGKSNLISDIEQLAQGDTPSNRKI 63
           IKI      FG+++ +K +   + RGE+  V+GP+GSGKS  +  I  L Q   P+  +I
Sbjct: 2   IKISNLHKYFGDNQVLKGIDESIARGEVVSVIGPSGSGKSTFLRCINLLEQ---PTQGEI 58

Query: 64  LVNG-NVPDTEMRRDPRKRRIAQLSQNMNFLADMTVEEFLIMHAKSRGMNSEGIVDKVIK 122
           +++G ++   +   D  ++++  + QN N     TV++ + +     G+ ++   D    
Sbjct: 59  VIDGQSITAPDACIDKLRQKVGMVFQNFNLFPHKTVQQNITLAPVKLGLMTQAEADSEAM 118

Query: 123 LANNLTGEPIEKDYNLTILSGGQSRSLMVADVAVISDSPIVLIDEIENAGIKKH-----E 177
              +  G   +       LSGGQ + + +A  A+     ++L DE  +A   +      +
Sbjct: 119 RLLDQVGLSDKASAYPASLSGGQKQRVAIAR-ALAMKPELMLFDEPTSALDPEMVGDVLD 177

Query: 178 ALELLAGCGKIVMVITHDPVLALMTTRRVVMRNGG 212
            ++ LA  G  ++++TH+   A   + RV+  +GG
Sbjct: 178 VMKQLAQAGMTMVIVTHEMGFAKDVSDRVIFMDGG 212