Pairwise Alignments

Query, 263 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 230 a.a., lipoprotein releasing system ATP-binding protein LolD (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.1 bits (144), Expect = 4e-14
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)

Query: 23  ELVVKRGEIFGVVGPTGSGKSNLISDIEQLAQGDTPSNRKILVNGN---VPDTEMRRDPR 79
           +L V +GE   +VG +GSGKS L+  +  L   D PS+ K+L+ G       +  +   R
Sbjct: 29  DLQVFKGEQLAIVGTSGSGKSTLLHIMGTL---DKPSSGKVLLAGEDLYQVSSARQAQIR 85

Query: 80  KRRIAQLSQNMNFLADMTVEEFLIMHAKSRGMN------SEGIVDKVIKLANNLTGEPIE 133
            + +  + Q  + L + T  E + M A  +G +         ++ + + L + ++  P E
Sbjct: 86  NQDLGFIYQFHHLLPEFTALENVAMPAFIQGRDRTLAQADAKVLLERVGLGHRMSHIPAE 145

Query: 134 KDYNLTILSGGQSRSLMVADVAVISDSPIVLIDE-IENAGIKKHEAL-----ELLAGCGK 187
                  LSGG+ + + +A  A+I+   +VL DE   N   K  EA+     EL    G 
Sbjct: 146 -------LSGGERQRVAIAR-ALINKPKLVLADEPTGNLDAKSGEAVYELIRELANQLGT 197

Query: 188 IVMVITHDPVLALMTTRRVVMRNG 211
             +V+THDP LA    R++ M+NG
Sbjct: 198 AFVVVTHDPKLAARMDRQLTMKNG 221