Pairwise Alignments

Query, 232 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 242 a.a., hydrogenase accessory protein HypB from Synechococcus elongatus PCC 7942

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 6/171 (3%)

Query: 7   TPGAGKTSVMTHTIKQLLNKGNKPAVVKIDCLYTDDDTRYGKLKIPTLVGLSKDMCPDHF 66
           +PG+GKT+++  T+++L     +PA +  D     D  R      P +   + ++C  H 
Sbjct: 57  SPGSGKTALLERTLREL-PPTLRPAAIVGDLATDRDAQRLQATGAPAIQIETGELC--HL 113

Query: 67  AIYNLEEMAEWAEKEGVDTLIIETAG-LCHRCAPYTKNSLGICVIDATSGPNTPRKVGPF 125
               +       +   +D L IE  G L    A        + ++  T G + P K    
Sbjct: 114 EADLVHRACHQLDLSAIDILFIENVGNLVCPAAFDLGEERRVLLLSVTEGEDKPLKYPSA 173

Query: 126 LTSADVVAITKGDIISQAE--REVFRERVLEMNPKCTIYDVNGLSGQGCAE 174
            + AD+V ITK D+    E  +      +  +NP  TI  V+   GQG ++
Sbjct: 174 FSRADLVLITKVDLAEAVEFDQAAAIANLRAVNPTATILPVSSRGGQGWSD 224