Pairwise Alignments

Query, 232 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 224 a.a., hydrogenase accessory protein HypB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 30/191 (15%)

Query: 7   TPGAGKTSVMTHTIKQLLNKGNKPAVVKIDCLYTDDDTR------YGKLKIPTLVG--LS 58
           +PGAGKTSV+  T+  L ++  + AVV+ D L TD+D R         ++I T  G  L 
Sbjct: 37  SPGAGKTSVLERTLTDLRDE-FRMAVVEGD-LQTDNDARRVAATGARAVQINTDGGCHLD 94

Query: 59  KDMCPDHFAIYNLEEMAEWAEKEGVDTLIIETAG--LC---HRCAPYTKNSLGICVIDAT 113
            +M  D  + ++L ++         D L IE  G  +C     C    K    + ++  T
Sbjct: 95  SNMVLDAISNFDLADL---------DILFIENVGNLVCPVEFDCGEDHK----VALLSVT 141

Query: 114 SGPNTPRKVGPFLTSADVVAITKGDIISQAEREVFRER--VLEMNPKCTIYDVNGLSGQG 171
            G + P K       + V+ + K D++   + +V R R     +N   TIY+++  SG+G
Sbjct: 142 EGDDKPEKYPLLFNLSSVMLLNKVDLLPYVDFDVERARRFSTRLNQNLTIYELSCRSGEG 201

Query: 172 CAEISEEIMEA 182
            A   + + EA
Sbjct: 202 LAPWYDWLREA 212