Pairwise Alignments

Query, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

Subject, 270 a.a., tRNA pseudouridine(38-40) synthase TruA from Klebsiella michiganensis M5al

 Score = 59.3 bits (142), Expect = 8e-14
 Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 57/267 (21%)

Query: 3   IFKIA----YDGK--LSFQTQPHGETVCDKISNALLDCGYLDNKDRVPLYHGGRTDRGVA 56
           ++KIA    YDG     +Q Q    +V +K+  AL         + V ++  GRTD GV 
Sbjct: 9   VYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVA----NEPVNVFCAGRTDAGVH 64

Query: 57  ALGNYVVYEMDKKPVLPRVQSKLKWDGIWVLGCKK----------IEIFPEIEH------ 100
             G  V +E        R Q +   D  W LG             ++  P+  H      
Sbjct: 65  GTGQVVHFET-------RAQRQ---DAAWTLGVNANLPGDIAVRWVKPVPQDFHARFSAT 114

Query: 101 -RHYQYTLPNKNH----------------DVELMKKASEKLIGTHYFQNLSKRDKTKVKD 143
            R Y+Y + N                   D E M++A++ L+G + F +  +  + + + 
Sbjct: 115 ARRYRYVIYNHRLRPAVLSRGVTHYYLPLDAERMQRAAQCLLGENDFTSF-RAVQCQSRT 173

Query: 144 PVRTLYDIKISSNDYFITIDIFGESFLWNMVRRIIRLLSDIGKHKIENPEKFI-ELILSE 202
           P R +  I ++    ++ +DI   +F+ +MVR I+  L ++G      PE +I EL+ ++
Sbjct: 174 PWRNVMHINVTRYGAYVVVDIKANAFVHHMVRNIVGSLMEVGAG--NQPESWIAELLAAK 231

Query: 203 DYKKGYPPSPAEGLILVDVKTNIDIDL 229
           D       + AEGL LV V      DL
Sbjct: 232 DRTLAAATAKAEGLYLVSVDYPARYDL 258