Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (264), Expect = 2e-27
 Identities = 57/208 (27%), Positives = 116/208 (55%), Gaps = 10/208 (4%)

Query: 143 LILIAGLMLILSNVGYNISALLAGLGIGGLAVALAAKDTIENLIAGFIIIVDRPFKLGDW 202
           ++ + G+++ LS +G N++ +L G GI G+ +  A +DT+ N  AG ++++ RPF +GD+
Sbjct: 352 VVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDF 411

Query: 203 IKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANIVQTEIENFSERRKRQVKATIGLTYD 262
           +  GG +G V  + + +T +R+F + +I VPN+ I    I+N +  R R+V    G+ Y 
Sbjct: 412 VHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYS 471

Query: 263 TPVEKVKRAKEIIENVLNDHHGVV---DPIRVSFVEFGSFSLDLRVEYFVRDFGFDFFLN 319
              + + +A+ ++ +++  H  V+   +P  +      + S+D  V  +V+    D + +
Sbjct: 472 ---DDLLKAEAVLTDIVKSHPAVLKTPEP-NIKVHTLNTSSIDFIVRPWVKT---DDYWD 524

Query: 320 TKDEINIKIKEEFEKENIEFAFPTQTVY 347
              ++  ++K  F++E I   FP Q V+
Sbjct: 525 VYWDVTKEVKLRFDREGISIPFPQQDVH 552