Pairwise Alignments

Query, 351 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 1134 a.a., MscS Mechanosensitive ion channel from Pseudomonas syringae pv. syringae B728a

 Score = 83.6 bits (205), Expect = 2e-20
 Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 37/296 (12%)

Query: 69   VLFFKY----GLNNLVLPDNLSLWLNESLTVAITFAGVLFLLKIVDDIIVNYVVPIVEKS 124
            ++ ++Y    G N  ++P +LS +L   + + ITF     L  +++ +++         S
Sbjct: 811  IILYEYTSGTGANMSMVPISLSDFLGAGVIIVITFVLAGNLPGLLEVLVL---------S 861

Query: 125  ENTLDDQLVPLMRKLVKFLILIAGLMLILSNVGYN-------ISALLAGLGIGGLAVALA 177
               L          L+ + I   G +  LS +G +       ++AL  GLG G       
Sbjct: 862  RMNLAQGSAYATTTLLSYTIAGVGFVTTLSTLGVSWDKLQWLVAALSVGLGFG------- 914

Query: 178  AKDTIENLIAGFIIIVDRPFKLGDWIKWGGKEGIVEEVGIRSTRVRSFGDTLITVPNANI 237
             ++   N I+G +I+ +RP ++GD I  G   G V ++ IR+T +  F    I VPN   
Sbjct: 915  MQEIFANFISGIMILFERPVRIGDTITIGALSGTVSKIRIRATTITDFDRKDIIVPNKTF 974

Query: 238  VQTEIENFS-ERRKRQVKATIGLTYDTPVEKVKRAKEIIENVLNDHHGVV---DPIRVSF 293
            +  ++ N+S      +V   +G+ Y + ++ V   + ++     ++  V+   +PI V F
Sbjct: 975  ITGQLINWSLTDTVTRVTLKLGVDYGSDLDLV---RSLLLQAARENPRVLKEPEPI-VYF 1030

Query: 294  VEFGSFSLDLRVEYFVRDFGFDFFLNTKDEINIKIKEEFEKENIEFAFPTQTVYYK 349
            + FG  +LD  +   VRD G        DEIN  I  EF+K++I  +F    +Y K
Sbjct: 1031 LNFGESTLDHELRMHVRDLGDR--NPVLDEINRFINREFKKQHINISFRQMEIYLK 1084